Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 AC135001.1-201ENST00000544546 283 ntBASIC4.37□□□□□ -1.71
EHD3Q9NZN3 CENPUP2-201ENST00000555897 1186 ntBASIC4.37□□□□□ -1.71
EHD3Q9NZN3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 MIR4504-201ENST00000577413 92 ntBASIC4.37□□□□□ -1.71
EHD3Q9NZN3 MIR4716-201ENST00000579628 84 ntBASIC4.37□□□□□ -1.71
EHD3Q9NZN3 AC091178.1-203ENST00000584586 279 ntBASIC4.37□□□□□ -1.71
EHD3Q9NZN3 AC006504.3-201ENST00000586818 523 ntBASIC4.37□□□□□ -1.71
EHD3Q9NZN3 AC103792.1-201ENST00000603591 919 ntBASIC4.37□□□□□ -1.71
EHD3Q9NZN3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 AC012409.3-201ENST00000611343 981 ntBASIC4.37□□□□□ -1.71
EHD3Q9NZN3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 AL359880.1-201ENST00000621879 266 ntBASIC4.37□□□□□ -1.71
EHD3Q9NZN3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.37□□□□□ -1.71
EHD3Q9NZN3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 CCT4P2-201ENST00000233836 1548 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AL136964.1-201ENST00000622038 2990 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 SNORA71.2-201ENST00000364941 134 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 MIR3074-201ENST00000384885 81 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 RPS3AP9-201ENST00000417027 792 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AL109913.1-201ENST00000421173 514 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC073464.1-201ENST00000429823 534 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 RPEP2-201ENST00000432149 701 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 BTF3P10-201ENST00000433415 495 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 RPS3AP54-201ENST00000435535 734 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 RPL22P17-201ENST00000438729 315 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC069285.2-201ENST00000440210 275 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 CEACAMP9-201ENST00000442990 513 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC010469.1-201ENST00000463864 576 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC069439.1-201ENST00000494739 167 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 FCF1P3-201ENST00000496394 590 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC006390.1-201ENST00000508068 283 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC009646.1-201ENST00000510455 318 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC074344.1-201ENST00000512823 224 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 RNU6-1003P-201ENST00000517099 105 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 HSPA8P13-201ENST00000523715 472 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 FAM92A1P1-201ENST00000528023 890 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AK6P1-201ENST00000540219 478 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC008966.2-201ENST00000606157 453 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 MLECP1-201ENST00000615893 709 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 PISRT1-201ENST00000626175 531 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AC099654.14-201ENST00000638599 341 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.36□□□□□ -1.71
EHD3Q9NZN3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EHD3Q9NZN3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC068254.2-201ENST00000623938 3577 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms