Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RN7SKP95-201ENST00000362860 303 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 SNORD82-201ENST00000365530 70 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 MIR181A2-201ENST00000384863 110 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 BX842559.1-201ENST00000419615 532 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 MTCO3P30-201ENST00000426425 670 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC019185.3-201ENST00000438805 323 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 KF459542.1-201ENST00000450908 553 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 TRBV26-201ENST00000456572 344 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC008155.2-201ENST00000464337 397 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 CABYRP1-201ENST00000465493 1045 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 RPL27AP5-201ENST00000469428 449 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 RPL23AP45-201ENST00000476406 468 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 RPS3AP6-201ENST00000484430 795 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC093663.2-201ENST00000484625 313 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 RPS27P21-201ENST00000486977 252 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 SRIP1-201ENST00000489235 288 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 TPT1P3-201ENST00000492841 512 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC104108.1-201ENST00000509930 412 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 SNORA31.21-201ENST00000517180 77 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 OR4P1P-201ENST00000530808 1136 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC087241.2-201ENST00000535801 324 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC051619.2-201ENST00000559063 397 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 RPL23AP84-201ENST00000571193 464 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 MIR5004-201ENST00000579078 107 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC023575.1-201ENST00000580510 358 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC107982.3-201ENST00000584957 985 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC010738.1-201ENST00000604970 987 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AP001033.2-201ENST00000609701 1003 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC090115.4-201ENST00000609970 188 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC096586.1-201ENST00000610267 561 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 RNA5SP183-201ENST00000362452 119 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 RNU6-619P-201ENST00000365146 108 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 RNU6-198P-201ENST00000384258 104 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 AL512633.1-201ENST00000399931 655 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 U3.37-201ENST00000408528 213 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 AC108032.1-201ENST00000416706 207 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 AC066692.1-201ENST00000421721 457 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 RPS13P2-201ENST00000437890 455 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 AL714022.1-201ENST00000439897 151 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 AL929288.2-201ENST00000446368 407 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 DPPA3P1-201ENST00000448050 469 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 YWHAEP1-201ENST00000453697 763 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 NAP1L1P3-201ENST00000462291 880 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 RPS12P20-201ENST00000464109 380 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 AC090515.1-201ENST00000465295 476 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 RPL21P126-201ENST00000470049 478 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 AC116337.2-201ENST00000477662 156 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 AC079804.2-201ENST00000490376 200 ntBASIC1.49□□□□□ -2.17
CDC42SE1Q9NRR8 RN7SL691P-201ENST00000494487 301 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms