Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 AC104623.2-202ENST00000623477 4002 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 SNORD81.2-201ENST00000365153 76 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 RNU6-444P-201ENST00000383988 108 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 SNORA70C-201ENST00000384538 135 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 RPL7P25-201ENST00000404151 721 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 OR9R1P-201ENST00000412200 877 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 PDCL2P1-201ENST00000419302 352 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 RPL37P1-201ENST00000432310 284 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 TAAR7P-201ENST00000436141 242 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 SNORA84-201ENST00000459229 133 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 AC090602.1-201ENST00000469695 252 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 AC091167.1-201ENST00000492017 396 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 AC139783.2-201ENST00000504847 1145 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 FKBP1BP1-201ENST00000553366 325 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 AC034105.3-201ENST00000565294 442 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 AC010928.3-201ENST00000587712 541 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 AL161729.3-201ENST00000603533 673 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 AL132765.2-201ENST00000610812 351 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 AL158801.5-201ENST00000623123 465 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 ERCC6-202ENST00000374127 1782 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 SOCS5P3-201ENST00000425115 1576 ntBASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM7Q9NR12 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 XPOTP1-201ENST00000443317 2398 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC007529.1-201ENST00000418574 2178 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC093535.2-201ENST00000624769 2326 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AL356432.1-201ENST00000405809 419 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 RNA5SP118-201ENST00000410385 109 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 RNU2-8P-201ENST00000410727 190 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 TPMTP2-201ENST00000414372 726 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 RGS17P1-201ENST00000423358 553 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 EIF1P3-201ENST00000423841 334 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 OR51AB1P-201ENST00000429046 620 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC005534.2-201ENST00000431047 433 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 ATP5HP2-201ENST00000433885 485 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 SEPT14P3-201ENST00000439401 183 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AL732372.2-207ENST00000445840 183 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 SEPT14P2-201ENST00000453405 183 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 HMGN3P1-201ENST00000453847 193 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 RPL31P50-201ENST00000471002 296 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC022034.3-201ENST00000471393 478 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 SEPT14P4-201ENST00000513445 186 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 RNU1-6P-201ENST00000516290 144 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 Vault.3-201ENST00000516676 95 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC104986.1-201ENST00000517978 436 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC022616.6-201ENST00000520479 119 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 FO082796.1-201ENST00000523795 183 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC078814.3-201ENST00000553036 491 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 HSPE1P3-201ENST00000559254 309 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC018638.8-201ENST00000588755 281 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 Y_RNA.812-201ENST00000610788 101 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC023043.4-201ENST00000612081 449 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC078899.5-201ENST00000612475 178 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 Y_RNA.784-201ENST00000613803 101 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 Y_RNA.787-201ENST00000616522 101 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 Y_RNA.780-201ENST00000617336 101 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 Y_RNA.801-201ENST00000619005 101 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC010149.2-201ENST00000637608 315 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 AC108467.2-201ENST00000617640 1597 ntBASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms