Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC140076.1-201ENST00000449897 361 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 TRBV26-201ENST00000456572 344 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 NAP1L1P3-201ENST00000462291 880 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 PABPC1P3-201ENST00000469174 459 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AC025518.1-201ENST00000479856 347 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AC118282.1-201ENST00000506408 765 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 FCF1P8-201ENST00000510322 597 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AC119751.1-201ENST00000513357 765 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 LSM6P2-201ENST00000552208 177 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 SNORD84-203ENST00000584275 78 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 SNORD39.3-201ENST00000584451 71 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 RN7SL622P-201ENST00000585292 275 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AC067852.3-201ENST00000589177 561 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 BDH2P1-201ENST00000602288 736 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AC073387.2-201ENST00000604797 784 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AC006329.2-201ENST00000611491 394 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AL355810.1-201ENST00000614629 552 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AC106730.3-201ENST00000624568 641 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AL645937.1-201ENST00000641739 1652 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 AC111188.2-201ENST00000529697 1387 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 RN7SKP111-201ENST00000410349 271 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 RN7SKP123-201ENST00000410732 291 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 SYF2P2-201ENST00000417620 583 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 UBE2V1P6-201ENST00000430840 422 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 AL353705.1-201ENST00000433468 480 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 Z95327.1-201ENST00000446082 482 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 RPL7P55-201ENST00000450522 746 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 AC093392.2-201ENST00000450682 337 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 AC011352.3-201ENST00000505162 593 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 APOOP4-201ENST00000513530 597 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 OR5B10P-201ENST00000532869 642 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 NIFKP8-201ENST00000560500 874 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 AC004832.5-201ENST00000608677 401 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 AL356321.1-201ENST00000621360 228 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 AC012442.3-202ENST00000636742 206 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 AC244258.1-201ENST00000637553 1071 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 CR383658.2-201ENST00000547576 1525 ntBASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.01□□□□□ -1.93
CCNB1IP1Q9NPC3 SGO1P2-201ENST00000429458 1589 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 MTND5P24-201ENST00000438892 1767 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 OR5H2-201ENST00000355273 945 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 RNA5SP50-201ENST00000363731 107 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 MRPL50P2-201ENST00000416821 482 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 RPL21P32-201ENST00000419877 477 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AC099677.1-201ENST00000420575 175 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 RPL31P54-201ENST00000429803 370 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 OR2B8P-201ENST00000432841 938 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 SNRPEP4-201ENST00000435815 279 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AL096803.2-201ENST00000450032 677 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AL353718.1-201ENST00000451028 517 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 NDUFAF4P3-201ENST00000456468 525 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 RPS23P3-201ENST00000470993 430 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms