Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 METTL5-202ENST00000308099 629 ntTSL 3 BASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC007066.1-201ENST00000392902 381 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC006455.6-201ENST00000426192 893 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC108734.1-201ENST00000439549 399 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 RNFT1P2-201ENST00000443064 757 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC009961.3-201ENST00000449832 765 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC073387.1-201ENST00000453261 709 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AL109741.2-201ENST00000455561 343 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 RPL7P19-201ENST00000469948 618 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 RN7SKP18-201ENST00000516005 275 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AP000790.1-201ENST00000528891 737 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 HIGD1AP1-201ENST00000550979 275 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AL391156.1-201ENST00000554965 554 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 HSPE1P5-201ENST00000561489 272 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC106734.1-201ENST00000568646 663 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC023824.3-201ENST00000569003 562 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AGGF1P6-201ENST00000569213 976 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC053481.3-201ENST00000577881 843 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC060766.3-201ENST00000591442 263 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AL031985.2-201ENST00000600955 480 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC096947.1-201ENST00000603233 470 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC005229.3-201ENST00000603438 323 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC106900.2-201ENST00000604994 317 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AC015967.1-201ENST00000619893 476 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 RPL21P32-201ENST00000419877 477 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AL606495.1-201ENST00000422100 813 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 VN1R42P-201ENST00000424651 344 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 NIPA2P1-201ENST00000426223 976 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 CYCSP4-201ENST00000429682 331 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AC097713.2-201ENST00000430199 356 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AC129850.1-201ENST00000436203 508 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 RPL23AP31-201ENST00000456160 467 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 PABPC1P3-201ENST00000469174 459 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AP000852.1-201ENST00000472460 573 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 RN7SL20P-201ENST00000488827 297 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AC011352.3-201ENST00000505162 593 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AC111000.2-201ENST00000507775 550 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 CBX3P3-201ENST00000508108 532 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 SNORA48.9-201ENST00000516419 162 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 SCARNA13-201ENST00000516672 275 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AC103843.2-201ENST00000530523 682 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AC025884.1-201ENST00000556034 378 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 RN7SL339P-201ENST00000580597 296 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 MIR3939-201ENST00000582614 106 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AC009220.3-201ENST00000604318 586 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AL162713.1-201ENST00000604480 262 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AC073657.2-201ENST00000605661 303 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AC090912.3-201ENST00000609775 533 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AC105227.2-201ENST00000615075 605 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 AP000676.4-201ENST00000624659 623 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 GABRG2-229ENST00000641017 3628 ntBASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VCX3AQ9NNX9 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 OR5T3-201ENST00000303059 1023 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 MIR6073-201ENST00000352083 89 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC092447.6-201ENST00000414578 210 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AL117339.2-201ENST00000430475 180 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 ZFAND6P1-201ENST00000434138 605 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 MTCYBP34-201ENST00000439552 670 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 RPL21P89-201ENST00000444021 467 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 ST13P20-201ENST00000447996 1065 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 BTF3P5-201ENST00000457252 467 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AP002812.1-201ENST00000495378 474 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC090136.1-201ENST00000520009 240 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC007991.1-201ENST00000522680 631 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 AC125611.2-201ENST00000551907 647 ntBASIC2.77□□□□□ -1.97
VCX3AQ9NNX9 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms