Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 PHBP17-201ENST00000528576 541 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 AC037471.2-201ENST00000564941 598 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 AL451049.1-201ENST00000608672 497 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 AC068722.2-201ENST00000618734 544 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 MIR6830-201ENST00000636015 70 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 AC093849.1-201ENST00000563631 2209 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 AC108751.5-201ENST00000492880 1336 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 MTCO1P7-201ENST00000419523 1542 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 RLIMP2-201ENST00000427891 1563 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 LINC00622-201ENST00000562811 1570 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 Y_RNA.46-201ENST00000362695 102 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 RNU1-130P-201ENST00000363930 160 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 RN7SKP227-201ENST00000364445 330 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 Y_RNA.431-201ENST00000384086 102 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 MIR137-201ENST00000385223 102 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 RNU6-952P-201ENST00000391164 108 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 OR9R1P-201ENST00000412200 877 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 MTATP6P18-201ENST00000417994 673 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 RPL12P34-201ENST00000424532 479 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AL353777.1-201ENST00000425552 326 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 MTCO3P46-201ENST00000425787 232 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 RPS26P40-201ENST00000435209 294 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AL031663.1-201ENST00000437445 219 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 HMGB3P9-201ENST00000441799 583 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AC140076.1-201ENST00000449897 361 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 ZFRP1-201ENST00000457579 2970 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 RNU6-261P-201ENST00000459506 102 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AC034159.1-201ENST00000513885 583 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AC108471.1-201ENST00000513977 287 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 Vault.3-201ENST00000516676 95 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 IGLVIV-65-201ENST00000517313 360 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AP003181.2-201ENST00000528941 181 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AC015912.2-201ENST00000571053 181 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AC008966.2-201ENST00000606157 453 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AL161734.1-201ENST00000609720 557 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 AC025031.4-201ENST00000621248 3271 ntBASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.16□□□□□ -1.58
BCAS3Q9H6U6 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
BCAS3Q9H6U6 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.58
BCAS3Q9H6U6 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.15□□□□□ -1.58
BCAS3Q9H6U6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
BCAS3Q9H6U6 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
BCAS3Q9H6U6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
BCAS3Q9H6U6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.15□□□□□ -1.58
BCAS3Q9H6U6 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
BCAS3Q9H6U6 AL645937.1-201ENST00000641739 1652 ntBASIC5.15□□□□□ -1.58
BCAS3Q9H6U6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
BCAS3Q9H6U6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
BCAS3Q9H6U6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
BCAS3Q9H6U6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
BCAS3Q9H6U6 RNU6-730P-201ENST00000383954 104 ntBASIC5.15□□□□□ -1.59
BCAS3Q9H6U6 TMSB10P2-201ENST00000416049 131 ntBASIC5.15□□□□□ -1.59
BCAS3Q9H6U6 AC234781.4-201ENST00000419384 244 ntBASIC5.15□□□□□ -1.59
BCAS3Q9H6U6 AL139095.3-201ENST00000419672 1203 ntBASIC5.15□□□□□ -1.59
BCAS3Q9H6U6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.15□□□□□ -1.59
BCAS3Q9H6U6 RPL12P18-201ENST00000437175 325 ntBASIC5.15□□□□□ -1.59
BCAS3Q9H6U6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms