Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 OR4T1P-201ENST00000554933 911 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AL845331.3-202ENST00000562856 261 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 MIR4444-1-201ENST00000581696 74 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 MIR4444-2-201ENST00000584390 74 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AC078880.5-201ENST00000617845 421 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AL356321.1-201ENST00000621360 228 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AL360181.4-201ENST00000621752 134 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 MIR7153-201ENST00000637758 57 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 MIR30E-201ENST00000362104 92 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 RNU1-33P-201ENST00000364249 162 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 RNU6-354P-201ENST00000383862 107 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 RNU6-610P-201ENST00000384264 107 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 SNORD116-23-201ENST00000384645 92 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 MIR670-201ENST00000390142 98 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AC109780.2-201ENST00000413467 845 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 YPEL5P1-201ENST00000419731 367 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AL159987.2-201ENST00000432754 307 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 SEPT14P24-201ENST00000447236 180 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 RPL21P10-201ENST00000463521 490 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AC004801.2-202ENST00000463559 283 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 MLLT10P2-201ENST00000506434 249 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AC105914.1-201ENST00000511798 226 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AC010265.1-201ENST00000513509 211 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 RNU6-467P-201ENST00000517027 110 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AC011611.1-201ENST00000552179 197 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AC015917.1-201ENST00000579654 510 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 MIR4276-201ENST00000584832 70 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AC124312.4-201ENST00000605533 310 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AL365400.2-201ENST00000605604 902 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AC019176.2-201ENST00000611579 315 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AL592295.2-201ENST00000612578 206 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 SNORD39.4-201ENST00000620099 78 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 MIR6075-201ENST00000620782 95 ntBASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
POLR1EQ9GZS1 AC010733.2-201ENST00000589496 5702 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 NUP58P1-201ENST00000502546 1738 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 RNU6-1074P-201ENST00000383995 104 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 MIR7-3-201ENST00000384898 110 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 MIR183-201ENST00000384958 110 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 MIR184-201ENST00000384962 84 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AL024474.1-201ENST00000404655 591 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 HMGB3P23-201ENST00000414981 585 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 FCF1P2-201ENST00000415284 583 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 OR1AA1P-201ENST00000419597 916 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC012065.2-201ENST00000421295 375 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 UBE2V1P6-201ENST00000430840 422 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 MRPS31P2-201ENST00000451581 518 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 ARPC3P2-201ENST00000457786 533 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC010468.1-201ENST00000461022 817 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 RPL21P13-201ENST00000488305 481 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC084024.2-201ENST00000503480 791 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC091860.1-201ENST00000505723 432 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 CCNG2P1-201ENST00000549521 1000 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC005476.1-201ENST00000554427 397 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC011492.1-201ENST00000600023 315 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 AC055876.5-201ENST00000605667 259 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 U6.105-201ENST00000637379 88 ntBASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
POLR1EQ9GZS1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms