Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AL442163.2-201ENST00000553912 710 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 AL021368.1-201ENST00000607490 540 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 AL359535.1-201ENST00000612100 1087 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 FRG1HP-204ENST00000617940 757 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 ZNF33CP-201ENST00000432492 2030 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 AL645568.2-201ENST00000432815 1337 ntBASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
RPAP1Q9BWH6 MIR22-201ENST00000362190 85 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 RNU6-1293P-201ENST00000384077 107 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 SNORA48.8-201ENST00000391324 134 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 MTND4LP20-201ENST00000402379 270 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 RPL37P4-201ENST00000448908 268 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AL035407.2-201ENST00000454090 378 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 TVP23BP2-201ENST00000455082 615 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 MTND2P30-201ENST00000456663 382 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 VN1R104P-201ENST00000505115 1009 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC090312.2-201ENST00000582687 378 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC012254.4-201ENST00000588843 273 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 ZNF92P2-201ENST00000600543 1059 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AL163051.2-201ENST00000618976 735 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 RNU6-156P-201ENST00000621869 107 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AL365361.1-201ENST00000566942 3481 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AL021368.2-201ENST00000606125 5352 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 UBE2V1P5-201ENST00000440070 405 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC112492.1-201ENST00000449607 712 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 DNAJC19P8-201ENST00000452887 259 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 RPL21P18-201ENST00000469899 480 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC092451.1-201ENST00000480211 153 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC026801.2-201ENST00000515352 425 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 MTND2P26-201ENST00000528255 1029 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC074029.1-201ENST00000552531 1044 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 OR4T1P-201ENST00000554933 911 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 MIR3945-201ENST00000581853 98 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC007687.1-201ENST00000602704 304 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 LLPHP1-201ENST00000603571 367 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AL590396.2-201ENST00000636511 1041 ntBASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.63□□□□□ -1.83
RPAP1Q9BWH6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 XPOTP1-201ENST00000443317 2398 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 SEC63P2-201ENST00000503863 1939 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 GABRG2-229ENST00000641017 3628 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 GABPAP-201ENST00000419271 1356 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AC093908.1-201ENST00000623125 8092 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 MIR449A-201ENST00000362113 91 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 DNAJC19P6-201ENST00000401853 280 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 PRRC2CP1-201ENST00000404428 159 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 VN1R42P-201ENST00000424651 344 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AC073508.1-201ENST00000428866 656 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AC105272.1-201ENST00000438604 198 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AC093156.1-201ENST00000440382 670 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 snoU13.7-201ENST00000459220 104 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AC083906.5-201ENST00000503722 328 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 RN7SKP96-201ENST00000516948 297 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms