Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 MTATP6P22-201ENST00000507369 598 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 SNORA3.4-201ENST00000515969 96 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 RANP9-201ENST00000519957 271 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 MTND2P38-201ENST00000522536 667 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AP001189.2-201ENST00000527320 189 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC090888.2-201ENST00000559765 1144 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AL354943.1-201ENST00000572103 781 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC069304.3-201ENST00000603938 1084 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AL451074.6-201ENST00000608512 729 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC079416.3-201ENST00000624479 549 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC112200.1-201ENST00000625015 234 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 MKKS-204ENST00000639674 192 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 ZNF33CP-201ENST00000432492 2030 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC28BQ9BUN5 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CCDC28BQ9BUN5 AC004972.1-201ENST00000623934 2209 ntBASIC3.4□□□□□ -1.86
CCDC28BQ9BUN5 ELL2P4-201ENST00000446870 1376 ntBASIC3.4□□□□□ -1.86
CCDC28BQ9BUN5 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC28BQ9BUN5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC28BQ9BUN5 RNU6-492P-201ENST00000363035 104 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 RNU6-1214P-201ENST00000363650 109 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 RPL21P3-201ENST00000395517 478 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 RNA5SP80-201ENST00000410475 111 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC004022.2-201ENST00000413824 193 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 RPL26P29-201ENST00000415623 438 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 BOLA3P4-201ENST00000418151 400 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 NDUFA5P7-201ENST00000452914 242 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 NECAP1P2-201ENST00000455668 727 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 ANKRD26P4-201ENST00000455755 950 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC146507.2-201ENST00000460608 476 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC092754.2-201ENST00000463506 460 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 RPL23AP67-201ENST00000465341 474 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 RPL7P5-201ENST00000471472 736 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC093278.1-201ENST00000494700 600 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 WBP1LP4-201ENST00000505043 344 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC108064.1-201ENST00000513791 460 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC107934.2-201ENST00000518653 310 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 MED28P5-201ENST00000528254 438 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 MRPS36P5-201ENST00000551909 298 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC074051.3-201ENST00000570238 358 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC025811.1-201ENST00000604312 472 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC009220.3-201ENST00000604318 586 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC090425.2-201ENST00000608818 501 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC092954.1-201ENST00000609121 445 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC005962.2-201ENST00000611427 652 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AL359535.1-201ENST00000612100 1087 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC005332.6-201ENST00000613178 446 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC069209.1-201ENST00000619282 651 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC073348.1-201ENST00000623002 331 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC092184.1-201ENST00000625042 715 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC019226.2-201ENST00000625973 424 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AC068620.4-201ENST00000636730 1182 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 AP004289.2-201ENST00000444413 1457 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC28BQ9BUN5 MTND5P31-201ENST00000419366 1374 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AL121657.1-201ENST00000327215 531 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 RNU6-251P-201ENST00000363235 104 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 RNA5SP391-201ENST00000363456 119 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms