Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AC005154.2-201ENST00000438110 379 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AC011753.3-201ENST00000443436 406 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AC073264.2-201ENST00000448886 166 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 RN7SL558P-201ENST00000497468 299 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 RNA5SP249-201ENST00000516127 99 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 RNU6-709P-201ENST00000517257 104 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AP006289.1-201ENST00000538089 277 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AC093591.2-201ENST00000565254 3843 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AC011477.5-201ENST00000586571 259 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 OR10AB1P-201ENST00000609613 938 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AL133173.2-201ENST00000614270 90 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 MIR6780A-201ENST00000615089 68 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AL731566.2-201ENST00000618971 317 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 MTND1P37-201ENST00000636562 264 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 ERCC6-202ENST00000374127 1782 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 PCAT14-202ENST00000627127 3935 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC139713.2-215ENST00000641428 5037 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 TLK1P1-201ENST00000456760 2440 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 SNORD56.2-201ENST00000363242 71 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 Y_RNA.159-201ENST00000363674 87 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 RNU1-130P-201ENST00000363930 160 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 XGY1-201ENST00000381172 446 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 RNU6-730P-201ENST00000383954 104 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 Y_RNA.481-201ENST00000384373 102 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 Y_RNA.509-201ENST00000384506 99 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 Y_RNA.535-201ENST00000384612 99 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AL049693.1-201ENST00000402760 611 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AL356421.1-201ENST00000403255 413 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC119751.6-201ENST00000416712 186 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AL590233.1-201ENST00000430017 456 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 SDCBPP1-201ENST00000440192 890 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 RPL21P133-201ENST00000443666 476 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC002553.2-201ENST00000453217 340 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AL356981.1-201ENST00000454879 684 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 RPL23AP72-201ENST00000492447 435 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC023194.1-201ENST00000493084 308 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC022616.6-201ENST00000520479 119 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 RPL23AP53-201ENST00000521854 457 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 CENPUP1-201ENST00000526649 1202 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms