Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AC233981.1-201ENST00000423224 461 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 OR51AB1P-201ENST00000429046 620 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 GTF2IP3-201ENST00000433887 494 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 TPT1P12-201ENST00000448968 492 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 DUXAP8-207ENST00000456786 622 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AL139824.2-201ENST00000458731 1095 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 RPL5P23-201ENST00000496040 868 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 TMEM248P1-201ENST00000510579 951 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 RNA5SP135-201ENST00000517019 125 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AC010376.1-201ENST00000522101 334 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 DEFB130C-202ENST00000530001 230 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AC022069.1-201ENST00000582910 658 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 MIR4443-201ENST00000585052 53 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AL160237.3-201ENST00000604114 1013 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 DUXAP10-204ENST00000612052 616 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AL592148.2-201ENST00000612210 372 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 AC118273.1-201ENST00000525324 3006 ntBASIC3.1□□□□□ -1.91
EBF4Q9BQW3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
EBF4Q9BQW3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC007256.1-201ENST00000392253 2765 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 ZNF33CP-201ENST00000432492 2030 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC117529.2-201ENST00000512159 2068 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 ANKRD36P1-201ENST00000344424 659 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 RNU6-1226P-201ENST00000384317 107 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 Y_RNA.578-201ENST00000390903 88 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 MIR937-201ENST00000401271 86 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AL079342.2-201ENST00000403367 482 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 RPS3AP9-201ENST00000417027 792 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 SDCBPP3-201ENST00000419629 891 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 RAC1P8-201ENST00000427086 527 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 Z93242.1-201ENST00000427102 353 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 RPL31P54-201ENST00000429803 370 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC073063.1-201ENST00000434352 607 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 RPS26P56-201ENST00000444468 240 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 RPL21P13-201ENST00000488305 481 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 DYNLL1P6-201ENST00000503440 264 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC113420.1-201ENST00000507903 571 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC023141.12-201ENST00000512399 199 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 OR4H12P-201ENST00000556269 907 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 SNORD39.3-201ENST00000584451 71 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC011468.4-201ENST00000603942 409 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC067959.1-201ENST00000604334 379 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC013244.3-201ENST00000605614 388 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AC009237.15-201ENST00000610252 501 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AL079305.1-201ENST00000623159 3008 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 AL672296.1-201ENST00000427780 2158 ntBASIC3.09□□□□□ -1.91
EBF4Q9BQW3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
EBF4Q9BQW3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms