Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL12A1Q99715 RNA5SP456-201ENST00000364002 114 ntBASIC2.05□□□□□ -2.08
COL12A1Q99715 SNORA40.18-201ENST00000391200 128 ntBASIC2.05□□□□□ -2.08
COL12A1Q99715 AC128657.1-201ENST00000549459 145 ntBASIC2.05□□□□□ -2.08
COL12A1Q99715 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
COL12A1Q99715 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC2.05□□□□□ -2.08
COL12A1Q99715 AC091046.2-201ENST00000620775 665 ntBASIC2.05□□□□□ -2.08
COL12A1Q99715 MIR583-201ENST00000384846 75 ntBASIC2.05□□□□□ -2.08
COL12A1Q99715 FGF7P8-201ENST00000402994 292 ntBASIC2.05□□□□□ -2.08
COL12A1Q99715 RNU2-68P-201ENST00000410878 191 ntBASIC2.05□□□□□ -2.08
COL12A1Q99715 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.05□□□□□ -2.08
COL12A1Q99715 AL355836.1-201ENST00000555951 870 ntBASIC2.05□□□□□ -2.08
COL12A1Q99715 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.05□□□□□ -2.08
COL12A1Q99715 AC061975.8-201ENST00000587058 721 ntBASIC2.05□□□□□ -2.08
COL12A1Q99715 AL353684.1-201ENST00000622677 1120 ntBASIC2.05□□□□□ -2.08
COL12A1Q99715 AC093311.1-201ENST00000506586 2021 ntBASIC2.05□□□□□ -2.08
COL12A1Q99715 AC011978.2-201ENST00000569835 2054 ntBASIC2.05□□□□□ -2.08
COL12A1Q99715 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.04□□□□□ -2.08
COL12A1Q99715 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
COL12A1Q99715 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL12A1Q99715 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL12A1Q99715 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
COL12A1Q99715 EIF5P1-201ENST00000400019 1231 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 RPL21P134-201ENST00000453468 483 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.04□□□□□ -2.08
COL12A1Q99715 ACTR6P1-201ENST00000514311 1104 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.04□□□□□ -2.08
COL12A1Q99715 PHKBP1-201ENST00000450951 1951 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.04□□□□□ -2.08
COL12A1Q99715 Y_RNA.295-201ENST00000364918 102 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 RNU6-805P-201ENST00000365643 106 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 RNU6-316P-201ENST00000391027 107 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 AL583834.1-201ENST00000406943 343 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
COL12A1Q99715 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.04□□□□□ -2.08
COL12A1Q99715 AC107871.2-201ENST00000612894 502 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 MIR1291-201ENST00000627649 87 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
COL12A1Q99715 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL12A1Q99715 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL12A1Q99715 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL12A1Q99715 RNU1-75P-201ENST00000347264 129 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 LAP3P1-201ENST00000403648 294 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 RHEBP3-201ENST00000411920 351 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC2.04□□□□□ -2.08
COL12A1Q99715 AC072039.1-201ENST00000477611 581 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 SNORA9.3-201ENST00000516383 129 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.04□□□□□ -2.08
COL12A1Q99715 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.04□□□□□ -2.08
COL12A1Q99715 AL365503.1-201ENST00000605247 905 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 LINC00216-201ENST00000623548 1126 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.04□□□□□ -2.08
COL12A1Q99715 CRYM-AS1-204ENST00000637983 556 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 Z99496.1-201ENST00000469424 1477 ntBASIC2.04□□□□□ -2.08
COL12A1Q99715 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL12A1Q99715 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL12A1Q99715 RNU6-392P-201ENST00000364926 101 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 MIR137-201ENST00000385223 102 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 RPL23AP45-201ENST00000476406 468 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 ASNSP4-201ENST00000511103 447 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 RPL23AP84-201ENST00000571193 464 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 AC009487.2-201ENST00000420969 6821 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 AC090229.1-201ENST00000590983 1609 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL12A1Q99715 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL12A1Q99715 AL353743.4-201ENST00000422653 1547 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC2.03□□□□□ -2.08
COL12A1Q99715 Y_RNA.224-201ENST00000364308 111 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 RN7SKP285-201ENST00000410137 318 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 AL451074.5-201ENST00000415894 435 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.03□□□□□ -2.08
COL12A1Q99715 RPL23AP58-201ENST00000440453 469 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 VWA8P1-201ENST00000510889 176 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.03□□□□□ -2.08
COL12A1Q99715 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC2.03□□□□□ -2.08
COL12A1Q99715 CR589904.2-201ENST00000612533 440 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 U7.8-201ENST00000619968 63 ntBASIC2.03□□□□□ -2.08
COL12A1Q99715 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.03□□□□□ -2.08
COL12A1Q99715 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
COL12A1Q99715 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.03□□□□□ -2.09
COL12A1Q99715 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL12A1Q99715 AL034379.1-201ENST00000423216 253 ntBASIC2.02□□□□□ -2.09
COL12A1Q99715 PPIAP17-201ENST00000438507 471 ntBASIC2.02□□□□□ -2.09
COL12A1Q99715 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC2.02□□□□□ -2.09
COL12A1Q99715 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.02□□□□□ -2.09
COL12A1Q99715 RN7SKP43-201ENST00000516173 320 ntBASIC2.02□□□□□ -2.09
COL12A1Q99715 VN1R80P-201ENST00000597126 338 ntBASIC2.02□□□□□ -2.09
COL12A1Q99715 WISP1-OT1-201ENST00000602893 642 ntBASIC2.02□□□□□ -2.09
COL12A1Q99715 AC092628.2-201ENST00000622492 339 ntBASIC2.02□□□□□ -2.09
COL12A1Q99715 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.02□□□□□ -2.09
COL12A1Q99715 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.02□□□□□ -2.09
COL12A1Q99715 KCTD9P5-201ENST00000504141 1170 ntBASIC2.02□□□□□ -2.09
COL12A1Q99715 AC005296.1-201ENST00000616145 209 ntBASIC2.02□□□□□ -2.09
COL12A1Q99715 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.02□□□□□ -2.09
COL12A1Q99715 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL12A1Q99715 RNU1-91P-201ENST00000364746 163 ntBASIC2.02□□□□□ -2.09
COL12A1Q99715 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL12A1Q99715 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC2.02□□□□□ -2.09
COL12A1Q99715 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC2.02□□□□□ -2.09
COL12A1Q99715 AP004217.1-201ENST00000480579 346 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms