Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 SNORA60-201ENST00000362396 134 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 RNA5SP443-201ENST00000363083 132 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 SNORA7.2-201ENST00000364446 145 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 HSPE1P8-201ENST00000406997 288 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 RPL7AP73-201ENST00000413490 353 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 RPS29P17-201ENST00000430795 166 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 YWHAZP7-201ENST00000436906 631 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AL117351.1-201ENST00000438864 766 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 RPS17P13-201ENST00000448974 407 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AC009220.1-201ENST00000451614 275 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 RPL23AP35-201ENST00000451906 501 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 MTCO3P11-201ENST00000455103 774 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 DNAJC19P1-201ENST00000455312 319 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 SUMO2P2-201ENST00000456482 255 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 CFTRP1-201ENST00000456646 183 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 RPS4XP10-201ENST00000465034 731 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AC068587.2-201ENST00000478386 781 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AC104685.1-201ENST00000502445 371 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AC021146.1-201ENST00000511202 716 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AC010625.1-201ENST00000511296 403 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AC099522.1-202ENST00000514718 367 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 UBE2NP1-201ENST00000545592 458 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AC126177.3-201ENST00000551839 688 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 MIR4277-201ENST00000578298 84 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 MIR4999-201ENST00000585029 91 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 VN1R90P-201ENST00000595717 726 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AL390208.1-201ENST00000605885 644 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 MIR7151-201ENST00000617477 60 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 CR381670.1-201ENST00000624291 1693 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.04□□□□□ -1.6
CCDC136Q96JN2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC136Q96JN2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 RNU6-777P-201ENST00000364265 104 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 SNORA51.2-201ENST00000364595 132 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 SNORD51-201ENST00000384320 80 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 CYCSP45-201ENST00000402289 315 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 RNU6-712P-201ENST00000410558 100 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AC016397.1-201ENST00000412463 242 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AC245052.5-201ENST00000416320 649 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 MTATP6P27-201ENST00000416987 621 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AIMP1P1-201ENST00000418670 937 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 ARPC3P5-201ENST00000448802 534 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 USP9YP10-201ENST00000454868 628 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 MTCO3P20-201ENST00000454926 688 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 RPL23AP24-201ENST00000458203 385 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AP001992.1-205ENST00000462248 379 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AC093677.1-201ENST00000514414 678 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AC009643.1-201ENST00000532030 391 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 KPNA2P3-201ENST00000584190 848 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 BBIP1P1-201ENST00000602999 279 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AL596327.1-201ENST00000603629 213 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 AC091905.1-201ENST00000624400 311 ntBASIC5.03□□□□□ -1.6
CCDC136Q96JN2 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC136Q96JN2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC136Q96JN2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms