Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHAMP1Q96JM3 MTND4P12-201ENST00000498999 1377 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 KPNA2P2-201ENST00000419546 1489 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 OR5J1P-201ENST00000313544 939 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 Y_RNA.573-201ENST00000384763 105 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AC016769.3-201ENST00000396562 315 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 MTCO1P17-201ENST00000411522 491 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 USP9YP27-201ENST00000418455 438 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AC002486.1-201ENST00000435098 391 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 SLC25A18P1-201ENST00000449385 454 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 RPL36AP41-201ENST00000493820 306 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 RNU6-201P-201ENST00000517100 61 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 ZNF705CP-201ENST00000530515 889 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AC021006.3-201ENST00000530771 192 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AC008033.2-201ENST00000542626 177 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AC025678.1-201ENST00000567861 338 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AC034268.2-201ENST00000571784 482 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AL031320.1-201ENST00000604177 357 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AL590392.1-201ENST00000604960 446 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AP003122.6-201ENST00000623831 495 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 CR381572.2-201ENST00000624852 397 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AC010928.1-201ENST00000592477 1447 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 AC010329.2-201ENST00000595195 2737 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 ERCC6-202ENST00000374127 1782 ntBASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHAMP1Q96JM3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 XPOTP1-201ENST00000443317 2398 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 MAPK10-253ENST00000641010 4072 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 RNU1-63P-201ENST00000383902 164 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AL591848.1-201ENST00000413092 322 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AC114755.2-201ENST00000413520 361 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AL451062.2-201ENST00000427515 271 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 RPL31P35-201ENST00000431058 377 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 FCF1P1-201ENST00000432690 571 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 ARPC3P1-201ENST00000437218 533 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AC073264.2-201ENST00000448886 166 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 GAPDHP56-201ENST00000506031 988 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 OR7H2P-201ENST00000513483 306 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 IGKV2-23-201ENST00000518729 323 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AP000859.1-201ENST00000525536 307 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 MTND1P35-201ENST00000526739 508 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AL512310.1-201ENST00000548639 172 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AL512360.1-201ENST00000555346 234 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 RPL12P25-202ENST00000598100 674 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 AP003117.2-201ENST00000606010 545 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 RNU6-87P-201ENST00000607561 108 ntBASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.28□□□□□ -1.56
CHAMP1Q96JM3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms