Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 OR6C73P-201ENST00000546432 358 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 MIR4697-201ENST00000582977 78 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC022916.3-201ENST00000592961 742 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC068790.4-201ENST00000602474 263 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC008745.1-201ENST00000604064 271 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 NDUFA8P1-201ENST00000605525 367 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 MIR378J-201ENST00000611988 109 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 AL589743.7-201ENST00000612637 233 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS50Q96JG6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC092447.7-201ENST00000422212 1621 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 MFSD8-216ENST00000641147 4009 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC105074.1-201ENST00000623380 3095 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS50Q96JG6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS50Q96JG6 AC067945.1-201ENST00000342609 618 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 RNU6-769P-201ENST00000384407 104 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 SNORA40.3-201ENST00000390964 122 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 RPL31P1-201ENST00000398116 372 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 AL031679.1-201ENST00000400616 525 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 RN7SKP266-201ENST00000410232 287 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 RN7SKP56-201ENST00000410513 331 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 RN7SKP167-201ENST00000411047 285 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 HMGN1P14-201ENST00000412459 517 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 AC004987.3-201ENST00000413879 771 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 UBE2V1P10-201ENST00000414685 269 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 ELOCP17-201ENST00000414751 326 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 RPL21P32-201ENST00000419877 477 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS50Q96JG6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 RPL23AP1-201ENST00000428990 471 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS50Q96JG6 FTH1P6-201ENST00000430768 320 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 ELOCP18-201ENST00000434209 337 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 MTND1P4-201ENST00000435196 415 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS50Q96JG6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 RPS20P21-201ENST00000466859 343 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 FAM172BP-201ENST00000487497 1089 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 RPL36AP41-201ENST00000493820 306 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 AC106872.3-201ENST00000495104 446 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 HSPA8P13-201ENST00000523715 472 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 MTND4LP18-201ENST00000526864 291 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 AC068587.4-201ENST00000533893 186 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 AC092470.1-201ENST00000546187 132 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS50Q96JG6 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 AC007424.1-203ENST00000554613 687 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS50Q96JG6 MIR5186-201ENST00000577504 120 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 YWHAQP7-201ENST00000603536 658 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 AC112187.2-201ENST00000604345 283 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 AC105429.2-201ENST00000610567 517 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
VPS50Q96JG6 CYP3A51P-201ENST00000633513 256 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 ZNF33CP-201ENST00000432492 2030 ntBASIC4.34□□□□□ -1.71
VPS50Q96JG6 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VPS50Q96JG6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VPS50Q96JG6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
VPS50Q96JG6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VPS50Q96JG6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 ERCC6-202ENST00000374127 1782 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC027287.1-201ENST00000553115 1453 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 FNDC3CP-201ENST00000420795 1155 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 AL513174.1-201ENST00000423182 629 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 AL645608.4-201ENST00000423619 154 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 MTCO3P30-201ENST00000426425 670 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC016712.1-201ENST00000431088 378 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS50Q96JG6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms