Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AC087369.1-201ENST00000520775 996 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 PDCL2P2-201ENST00000533651 189 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 CYCSP29-201ENST00000533731 318 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AP001029.3-201ENST00000588063 596 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 IPO5P1-202ENST00000600039 287 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AC006254.3-201ENST00000603353 884 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AC011468.4-201ENST00000603942 409 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AC091167.4-201ENST00000605079 184 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AL022578.1-201ENST00000439330 1433 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AL021368.2-201ENST00000606125 5352 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 U1.1-201ENST00000384101 164 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AL136372.1-201ENST00000403060 228 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 RPL21P32-201ENST00000419877 477 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 MTND3P1-201ENST00000441336 220 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 HMGB3P8-201ENST00000449709 577 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 RPL23AP62-201ENST00000463396 453 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 RPL31P50-201ENST00000471002 296 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AC105137.1-201ENST00000484355 562 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 FAM172BP-201ENST00000487497 1089 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 RN7SKP13-201ENST00000515933 244 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 RNA5SP179-201ENST00000517284 121 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AC091516.1-201ENST00000549191 703 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AL391156.1-201ENST00000554965 554 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 MIR4277-201ENST00000578298 84 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AC022916.3-201ENST00000592961 742 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AP001330.4-201ENST00000604350 154 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 TUG1_1.1-201ENST00000610654 145 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AC005962.2-201ENST00000611427 652 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 CR381670.1-201ENST00000624291 1693 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 AL136164.4-201ENST00000625013 2135 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 TAB3P1-202ENST00000452645 1634 ntBASIC3.7□□□□□ -1.82
VPS33AQ96AX1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AP002001.2-201ENST00000529025 1469 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 MIR513B-201ENST00000385136 84 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 RNU6-882P-201ENST00000391025 103 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 RNU6-952P-201ENST00000391164 108 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 USP9YP33-201ENST00000412220 421 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 RPS15AP38-201ENST00000413110 372 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AC108032.1-201ENST00000416706 207 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 RPL21P109-201ENST00000422213 475 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 DNAJC19P7-201ENST00000428811 344 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 MTCYBP45-201ENST00000435243 565 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 USP9YP35-201ENST00000435696 412 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 SKP1P1-201ENST00000438081 489 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 MTCYBP31-201ENST00000438855 1122 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AC104090.1-201ENST00000506341 1171 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AC093840.1-201ENST00000511599 336 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AC093677.1-201ENST00000514414 678 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 COX6CP8-201ENST00000522620 226 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AC023050.2-201ENST00000544968 387 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AC087465.1-201ENST00000560574 245 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms