Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RPL21P75-201ENST00000396599 483 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 RPL21P28-201ENST00000401418 483 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AL592114.1-201ENST00000403842 483 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 FAT1P1-201ENST00000406588 507 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 RNU2-17P-201ENST00000410290 190 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 DUTP6-201ENST00000425573 462 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AL451062.2-201ENST00000427515 271 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC114973.1-201ENST00000429057 632 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC146507.2-201ENST00000460608 476 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 RPL21P39-201ENST00000463605 483 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC011979.1-201ENST00000472300 483 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 RPL21P93-201ENST00000480465 489 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 RPL30P14-201ENST00000482744 348 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC233702.1-201ENST00000482905 502 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC087190.1-201ENST00000484462 480 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC093591.1-201ENST00000491435 481 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 RPL21P16-201ENST00000495531 483 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 MTCO3P44-201ENST00000510977 541 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 RN7SKP157-201ENST00000516174 282 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 SNORA31.8-201ENST00000516327 108 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC005242.1-201ENST00000585658 438 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC245036.5-201ENST00000596330 847 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AL513477.2-201ENST00000607858 568 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC105227.2-201ENST00000615075 605 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 MIR6075-201ENST00000620782 95 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC007275.1-201ENST00000621243 671 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC139713.2-210ENST00000641741 992 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 AC093831.2-201ENST00000624393 3427 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 AC090740.1-201ENST00000623193 2262 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 OR1S2-201ENST00000302592 978 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 MIR449B-201ENST00000384995 97 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 SNORD67-201ENST00000390833 111 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 SNORA26.7-201ENST00000391288 122 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 RNU6-272P-201ENST00000411028 104 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 AL159987.2-201ENST00000432754 307 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 Z96811.1-201ENST00000445880 108 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 HSPD1P15-201ENST00000505573 1122 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 OR4A45P-201ENST00000529954 901 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 AADACP1-206ENST00000561502 1193 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 MIR3944-201ENST00000581277 108 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 CKS1BP3-201ENST00000600888 237 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 AL031985.2-201ENST00000600955 480 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 AL162574.2-201ENST00000614618 657 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 AL109659.3-201ENST00000624985 950 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 AC017104.5-201ENST00000637647 639 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 OR8B1P-202ENST00000641132 1178 ntBASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLHC1Q8NHS4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 RNVU1-3-201ENST00000364313 161 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AC234772.1-201ENST00000377927 937 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 MIR7-3-201ENST00000384898 110 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 TAF9BP2-201ENST00000400856 499 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 RN7SKP58-201ENST00000411010 305 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AL389915.1-201ENST00000422463 466 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AC093151.1-201ENST00000427711 313 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AL590623.1-201ENST00000427864 105 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AC097713.2-201ENST00000430199 356 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 YWHAZP7-201ENST00000436906 631 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 Z75741.1-201ENST00000446793 314 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AL031183.1-201ENST00000457667 207 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 RN7SL601P-201ENST00000471221 293 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 RN7SL20P-201ENST00000488827 297 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 OR9N1P-202ENST00000494289 481 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 RNU6-202P-201ENST00000515998 96 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AP001804.3-201ENST00000525146 880 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 SETP2-201ENST00000553886 926 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AC004775.1-201ENST00000607389 753 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 232.7 ms