Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RN7SL502P-201ENST00000481857 290 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC092436.1-201ENST00000506450 503 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC091885.1-201ENST00000506658 268 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC023141.12-201ENST00000512399 199 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 RN7SKP258-201ENST00000517151 304 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AP005435.4-201ENST00000529514 284 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC021006.3-201ENST00000530771 192 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 RANP3-201ENST00000530970 276 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 OR5B10P-201ENST00000532869 642 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 BNIP3P6-201ENST00000549284 499 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AL355836.1-201ENST00000555951 870 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC022884.2-201ENST00000578535 580 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 RN7SL32P-201ENST00000580514 281 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC091135.1-201ENST00000585943 307 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC018638.8-201ENST00000588755 281 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 LARP7P1-201ENST00000605576 316 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 SNORA74.4-201ENST00000607595 199 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AP002360.3-201ENST00000607673 710 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AP001521.2-201ENST00000608772 546 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC104260.1-201ENST00000616660 539 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC018529.3-201ENST00000624212 2254 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 A2MP1-204ENST00000566278 4130 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AC092435.4-201ENST00000623012 4159 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AC067945.1-201ENST00000342609 618 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 RNU1-5P-201ENST00000362684 144 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 RNU6-1287P-201ENST00000362914 107 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 RNA5SP140-201ENST00000364524 92 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 SNORD56.6-201ENST00000384569 71 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 RNU6-1060P-201ENST00000384664 107 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 RNU6-1009P-201ENST00000390996 107 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 RNU4-46P-201ENST00000410818 138 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 RNA5SP155-201ENST00000411154 129 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AL160275.2-201ENST00000412010 394 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 TOMM22P1-201ENST00000418578 312 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AL732292.1-201ENST00000426692 226 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AC093106.2-201ENST00000428212 385 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 SRIP2-201ENST00000428470 166 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 FABP7P2-201ENST00000429946 379 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AC126120.1-201ENST00000431082 470 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AL121578.2-201ENST00000448797 447 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 NDUFS5P3-201ENST00000450668 321 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AL034369.1-201ENST00000453808 477 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AZGP1P2-201ENST00000454506 345 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 PMCHL2-203ENST00000457791 237 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AL162395.1-201ENST00000457882 422 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AC108751.2-201ENST00000469993 231 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AP003385.3-201ENST00000472498 287 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 S100A11P1-201ENST00000477525 312 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AC041039.1-201ENST00000485656 536 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 RPL39P36-201ENST00000490784 156 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 DUTP1-201ENST00000493631 470 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AC106872.2-201ENST00000494303 480 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 MTCO2P30-201ENST00000503662 364 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AC114324.2-202ENST00000503812 134 ntBASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.34□□□□□ -1.71
CLRN3Q8NCR9 OR4D12P-201ENST00000509361 911 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms