Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
C3orf56Q8N813 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
C3orf56Q8N813 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.36□□□□□ -2.03
C3orf56Q8N813 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.36□□□□□ -2.03
C3orf56Q8N813 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.36□□□□□ -2.03
C3orf56Q8N813 AL049874.4-201ENST00000557593 255 ntBASIC2.36□□□□□ -2.03
C3orf56Q8N813 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.36□□□□□ -2.03
C3orf56Q8N813 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.36□□□□□ -2.03
C3orf56Q8N813 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.36□□□□□ -2.03
C3orf56Q8N813 U6.48-201ENST00000618523 106 ntBASIC2.36□□□□□ -2.03
C3orf56Q8N813 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.36□□□□□ -2.03
C3orf56Q8N813 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
C3orf56Q8N813 AC011978.2-201ENST00000569835 2054 ntBASIC2.36□□□□□ -2.03
C3orf56Q8N813 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
C3orf56Q8N813 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
C3orf56Q8N813 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
C3orf56Q8N813 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
C3orf56Q8N813 RNU1-75P-201ENST00000347264 129 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 HMGB3P23-201ENST00000414981 585 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 AL513477.1-202ENST00000417061 214 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 AC093151.1-201ENST00000427711 313 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 OR51AB1P-201ENST00000429046 620 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 VDAC1P3-201ENST00000434069 851 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 MRPS33P4-201ENST00000434892 317 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.35□□□□□ -2.03
C3orf56Q8N813 RPL7P52-201ENST00000449200 742 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.35□□□□□ -2.03
C3orf56Q8N813 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.35□□□□□ -2.03
C3orf56Q8N813 snoU13.26-201ENST00000459452 105 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 FCF1P3-201ENST00000496394 590 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 RPL23AP55-201ENST00000498163 452 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.35□□□□□ -2.03
C3orf56Q8N813 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.35□□□□□ -2.03
C3orf56Q8N813 HIGD1AP13-201ENST00000509878 289 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 SNORA64.4-201ENST00000516632 81 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.35□□□□□ -2.03
C3orf56Q8N813 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.35□□□□□ -2.03
C3orf56Q8N813 AP006245.1-201ENST00000522549 120 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 EEF1A1P37-201ENST00000522748 715 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.35□□□□□ -2.03
C3orf56Q8N813 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.35□□□□□ -2.03
C3orf56Q8N813 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.35□□□□□ -2.03
C3orf56Q8N813 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.35□□□□□ -2.03
C3orf56Q8N813 MIR4769-201ENST00000584126 77 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 VN1R78P-201ENST00000597393 564 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 BDH2P1-201ENST00000602288 736 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 HMGN2P28-201ENST00000606102 262 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 AC091903.1-201ENST00000624322 454 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.35□□□□□ -2.03
C3orf56Q8N813 AC084035.1-201ENST00000634543 607 ntBASIC2.35□□□□□ -2.03
C3orf56Q8N813 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
C3orf56Q8N813 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.35□□□□□ -2.03
C3orf56Q8N813 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
C3orf56Q8N813 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
C3orf56Q8N813 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
C3orf56Q8N813 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
C3orf56Q8N813 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
C3orf56Q8N813 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
C3orf56Q8N813 RNU6-386P-201ENST00000362650 107 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 RNU6-452P-201ENST00000384406 107 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 AC110754.1-201ENST00000399740 601 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 RNA5SP229-201ENST00000410809 99 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 MYL8P-204ENST00000431574 518 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 TRIM60P18-201ENST00000441518 828 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 RPS27P5-201ENST00000444247 244 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 RPL34P26-201ENST00000445636 354 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 AL627224.1-201ENST00000448334 444 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 RPL36AP33-201ENST00000450395 310 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 AC108938.1-201ENST00000451204 136 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 OR7L1P-201ENST00000456181 380 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 SNORD109B-201ENST00000458961 67 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 SNORD109A-201ENST00000459128 67 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 HMGN1P8-201ENST00000463578 288 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 MTCO3P35-201ENST00000485582 781 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 AP000926.3-201ENST00000497201 299 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
C3orf56Q8N813 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 AC034268.2-201ENST00000571784 482 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 AC245128.3-201ENST00000594721 748 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 ZNF92P3-201ENST00000596594 954 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.34□□□□□ -2.03
C3orf56Q8N813 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 AC100793.4-201ENST00000613683 429 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 U73479.1-201ENST00000618062 168 ntBASIC2.34□□□□□ -2.03
C3orf56Q8N813 AL590808.1-201ENST00000618696 141 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms