Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC013356.1-201ENST00000489027 564 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 RN7SL691P-201ENST00000494487 301 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AF131216.2-201ENST00000512316 564 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AC006499.2-201ENST00000513470 337 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 RNA5SP519-201ENST00000516480 119 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 NARSP2-201ENST00000518524 679 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AP002453.2-201ENST00000533503 320 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AC087883.1-201ENST00000551882 391 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 ZNF519P3-201ENST00000557158 1032 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 SULT1C2P1-202ENST00000562418 459 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 BNIP3P11-201ENST00000603878 563 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 SEPT7P9-203ENST00000604116 343 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 HSPE1P14-201ENST00000605812 302 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AP000346.3-201ENST00000622821 210 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 OR4G11P-202ENST00000642116 1414 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 LINC00561-201ENST00000565815 2738 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AC139713.2-214ENST00000642059 1811 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 DSTNP4-201ENST00000399472 474 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 RHEBP3-201ENST00000411920 351 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 RPL7P30-201ENST00000420888 709 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AL138785.1-201ENST00000425821 331 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AL031667.1-201ENST00000440222 725 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 RPL7P31-201ENST00000450192 724 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 RPS29P33-201ENST00000456717 146 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 snoU13.1-201ENST00000459157 104 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AC007686.1-201ENST00000488511 463 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AC109464.2-201ENST00000510242 943 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AC110792.2-201ENST00000510278 224 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 OR4A12P-201ENST00000530847 918 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 OR6C73P-201ENST00000546432 358 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AC136619.2-201ENST00000563361 631 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 MIR4512-201ENST00000583257 77 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AC104785.1-201ENST00000603220 588 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AP000403.1-201ENST00000603349 851 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AL359535.1-201ENST00000612100 1087 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 MIR486-1-201ENST00000612171 68 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 MIR6864-201ENST00000617935 70 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 MIR7702-201ENST00000621931 59 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 AC099654.12-201ENST00000639868 649 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 GDI2P1-201ENST00000429312 1336 ntBASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLIP4Q8N3C7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 MARK2P15-201ENST00000432204 2186 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 RNU1-132P-201ENST00000364300 164 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 RNU5E-5P-201ENST00000365379 116 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 RNU6-259P-201ENST00000383999 107 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms