Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNA5SP197-201ENST00000363357 119 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 RNU1-33P-201ENST00000364249 162 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AL355379.1-201ENST00000405542 640 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AL023807.1-201ENST00000407932 359 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 MIR1250-201ENST00000408098 113 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AL133384.1-201ENST00000412744 351 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 RPS7P15-201ENST00000415804 584 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AC005517.2-201ENST00000424673 553 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 ARF4P2-201ENST00000430209 526 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 RPL23AP16-201ENST00000441715 421 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AL606517.1-201ENST00000446914 387 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AC006539.3-201ENST00000454258 129 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AC013828.1-201ENST00000481845 158 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 PCBP2P3-201ENST00000509726 843 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 RNU4-60P-201ENST00000517239 135 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 ZNF705CP-201ENST00000530515 889 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 SULT1C2P1-202ENST00000562418 459 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AC005412.1-201ENST00000580812 1049 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AC069200.1-201ENST00000609511 323 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AL050303.3-201ENST00000613704 284 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AC244100.1-202ENST00000621554 382 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AC127502.3-201ENST00000636170 1206 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AL359893.1-201ENST00000447628 1580 ntBASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 AL513302.2-201ENST00000562313 1842 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 NACA3P-201ENST00000359690 648 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 RNU4-68P-201ENST00000364314 141 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 SNORD6-201ENST00000365444 73 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 RNU6-413P-201ENST00000384115 107 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 RNU2-42P-201ENST00000410697 113 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 BX323014.1-201ENST00000412876 237 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 Z99755.1-201ENST00000414048 380 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 LUZP4P1-201ENST00000415420 344 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 MRPS36P1-201ENST00000421291 307 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 RPL7P44-201ENST00000424827 742 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AP000907.1-201ENST00000428428 510 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC097713.2-201ENST00000430199 356 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 TRBV26-201ENST00000456572 344 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC005410.1-202ENST00000460347 485 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC034236.1-201ENST00000469891 373 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC108734.3-201ENST00000481241 1165 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC093663.1-201ENST00000497190 394 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 MTCYBP16-201ENST00000509187 1129 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 FCF1P8-201ENST00000510322 597 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 SNORA70.19-201ENST00000516717 90 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 IGKV2D-36-201ENST00000518643 226 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC027309.2-201ENST00000520566 192 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC090502.2-201ENST00000549267 280 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC138915.2-201ENST00000569776 97 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AL390838.2-201ENST00000602394 274 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC006557.5-201ENST00000603126 811 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC024220.1-201ENST00000603675 484 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC025588.3-201ENST00000604182 274 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC091946.2-201ENST00000606105 291 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AL513477.2-201ENST00000607858 568 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC084757.4-201ENST00000616350 526 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC121761.2-201ENST00000617300 689 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 MIR7975-201ENST00000619350 68 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AL078595.3-201ENST00000623815 1166 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 MKKS-204ENST00000639674 192 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms