Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 RNU2-21P-201ENST00000410368 188 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 RNU2-50P-201ENST00000410494 143 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 RNU6-373P-201ENST00000411247 98 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AF186996.5-201ENST00000418098 904 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AC006512.1-201ENST00000468816 291 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AC020893.1-201ENST00000502452 580 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 HMGN1P13-201ENST00000505795 138 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 GAPDHP56-201ENST00000506031 988 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 FGF7P4-201ENST00000509595 295 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 OR4P1P-201ENST00000530808 1136 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AC037471.2-201ENST00000564941 598 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AC090615.1-201ENST00000577519 154 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 PRPF19P1-201ENST00000584766 898 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 VN1R80P-201ENST00000597126 338 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AC123768.4-201ENST00000616244 701 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AC010300.1-201ENST00000600671 5134 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 AP000756.2-201ENST00000624168 2567 ntBASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AP001642.1-201ENST00000624727 2117 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 IRF5P1-201ENST00000504852 2164 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 RNA5SP258-201ENST00000362750 119 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 RNU6-1097P-201ENST00000363586 107 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 Y_RNA.419-201ENST00000384041 102 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 SNORA32.2-201ENST00000384049 122 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 Y_RNA.460-201ENST00000384255 102 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 RNU6-603P-201ENST00000411403 107 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 SNRPFP1-201ENST00000414761 252 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC099336.2-201ENST00000422457 254 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 RPL35AP12-201ENST00000425362 338 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AL356276.2-201ENST00000435919 558 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 MRPL50P4-201ENST00000446432 475 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 RPL7P12-201ENST00000446719 750 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC239809.1-201ENST00000450470 217 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC091685.2-201ENST00000454924 864 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC099560.2-201ENST00000457554 255 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 RNU7-63P-201ENST00000459054 62 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC078785.3-201ENST00000476607 425 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 RPL23AP41-201ENST00000484754 458 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 BTF3P13-201ENST00000513224 490 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC021006.3-201ENST00000530771 192 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC008033.2-201ENST00000542626 177 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC092470.1-201ENST00000546187 132 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 OR4T1P-201ENST00000554933 911 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 TVP23CP2-201ENST00000571473 623 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 MTCYBP13-201ENST00000578634 1093 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC243960.4-201ENST00000600532 288 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC116447.1-201ENST00000613153 453 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 MIR6864-201ENST00000617935 70 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms