Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ARL4AP2-201ENST00000507378 601 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 RNA5SP385-201ENST00000515947 110 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 RN7SKP272-201ENST00000516988 232 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 MAGOH2P-202ENST00000584384 429 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AC073387.2-201ENST00000604797 784 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AC096577.2-201ENST00000611455 153 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 STMN1P1-201ENST00000617809 440 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AC018926.3-201ENST00000618841 406 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 ZNF37BP-203ENST00000452306 1352 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 MTND5P19-201ENST00000424872 1794 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 MTND5P28-201ENST00000438005 1594 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AC092435.3-201ENST00000565538 3654 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AL353743.1-202ENST00000431724 1695 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 MIR22-201ENST00000362190 85 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 RNU6-1005P-201ENST00000384519 107 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AL121972.1-201ENST00000402023 252 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AL031121.1-201ENST00000406553 254 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AC244505.4-201ENST00000434905 287 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 SSXP5-201ENST00000443473 287 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AC233982.1-201ENST00000451247 436 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 MRPL35P4-201ENST00000453682 566 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 MTND2P30-201ENST00000456663 382 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 snoU13.24-201ENST00000458998 104 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 PRELID3BP6-201ENST00000503839 571 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AC017100.2-201ENST00000584628 355 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 MIR4506-201ENST00000584693 77 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AL159169.3-201ENST00000608871 561 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AC007318.2-201ENST00000620999 243 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 AL136520.1-201ENST00000600311 1322 ntBASIC3.09□□□□□ -1.91
CDKL3Q8IVW4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
CDKL3Q8IVW4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 MTND5P11-201ENST00000511037 1812 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 RNU6-629P-201ENST00000384061 103 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 SNORA9-201ENST00000384215 133 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 RNVU1-14-201ENST00000384770 164 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 RPL17P50-201ENST00000396131 546 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 UBE2V1P11-201ENST00000411559 285 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 PNRC2P1-201ENST00000423940 420 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 AC073508.1-201ENST00000428866 656 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 AC104332.2-201ENST00000429959 156 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 AC005189.1-201ENST00000431286 310 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 AL513175.1-201ENST00000431492 780 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 RPS7P2-201ENST00000435134 607 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 RPS3AP12-201ENST00000443616 753 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 RPS24P6-201ENST00000452670 400 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 HMGB1P15-201ENST00000453854 435 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 RPS17P11-201ENST00000474297 293 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 RN7SL283P-201ENST00000489055 303 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 AC010468.3-201ENST00000508225 458 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 SNORA76.2-201ENST00000517095 137 ntBASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.08□□□□□ -1.92
CDKL3Q8IVW4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms