Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 RNA5SP391-201ENST00000363456 119 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 DSTNP4-201ENST00000399472 474 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 LUZP4P1-201ENST00000415420 344 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AC009237.2-201ENST00000421358 284 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 IPMKP1-201ENST00000425988 855 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AC013828.1-201ENST00000481845 158 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 NCOR1P1-202ENST00000486162 291 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AC147055.4-201ENST00000504399 745 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AC111000.2-201ENST00000507775 550 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 RNU6-759P-201ENST00000516740 103 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 IGKV2-26-201ENST00000518305 343 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 IGHV3-32-201ENST00000519182 355 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AC027309.2-201ENST00000520566 192 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AC107918.3-201ENST00000533272 382 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AC023161.2-201ENST00000551218 780 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AC074051.3-201ENST00000570238 358 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AL354976.1-201ENST00000613843 387 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AC107081.3-201ENST00000612715 2034 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AL353743.1-202ENST00000431724 1695 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 SCN1A-220ENST00000641603 12506 ntBASIC4.88□□□□□ -1.63
KRT28Q7Z3Y7 AL450326.2-201ENST00000421913 1962 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 RNU6-146P-201ENST00000384602 108 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AL353597.2-202ENST00000434901 373 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AL606662.1-201ENST00000445763 553 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AC082651.2-201ENST00000496833 166 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AC020893.1-201ENST00000502452 580 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AC023141.12-201ENST00000512399 199 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AC090819.1-201ENST00000523800 1111 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AL512347.1-201ENST00000566420 503 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AC124312.4-201ENST00000605533 310 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AC064807.4-201ENST00000607201 407 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 AC245297.2-201ENST00000610119 565 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 PHKBP1-201ENST00000450951 1951 ntBASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.87□□□□□ -1.63
KRT28Q7Z3Y7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 OR10J6P-201ENST00000289731 930 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 SNORA4.1-201ENST00000364263 144 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 SNORD116-1-201ENST00000384335 95 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AC068533.2-201ENST00000411872 306 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AL390023.1-201ENST00000428836 262 ntBASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.86□□□□□ -1.63
KRT28Q7Z3Y7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms