Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RPS4XP4-201ENST00000443195 763 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AC244505.5-201ENST00000443639 207 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AC239367.2-201ENST00000447309 705 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 RN7SL604P-201ENST00000492589 296 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AC074344.1-201ENST00000512823 224 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AC022483.1-201ENST00000514020 567 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 MTCO1P30-201ENST00000515244 580 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 DEFB131D-201ENST00000526803 184 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 OR4A45P-201ENST00000529954 901 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AL121579.1-201ENST00000555129 305 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 CYCSP2-201ENST00000558168 301 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AC090751.1-201ENST00000566966 267 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AC022968.1-201ENST00000567372 442 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 IPO5P1-202ENST00000600039 287 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 ARF4P1-201ENST00000605447 541 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AC027807.2-201ENST00000616099 408 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 LINC00901.1-201ENST00000617252 152 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 Z82217.1-201ENST00000625157 8149 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC119744.1-201ENST00000454746 1715 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 GDI2P1-201ENST00000429312 1336 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 OR5BR1P-201ENST00000524992 1330 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 SNORD35B-201ENST00000363660 87 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 SNORD115-47-201ENST00000391226 86 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 RPS3AP24-201ENST00000407896 734 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 CCDC58P2-201ENST00000417131 366 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AL953862.1-201ENST00000423016 168 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 RPL23AP38-201ENST00000423801 469 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 NIPA2P1-201ENST00000426223 976 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 COX6CP15-201ENST00000426313 211 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AL158073.1-201ENST00000426848 1104 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AL356276.2-201ENST00000435919 558 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 RPL7P31-201ENST00000450192 724 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 RPL26P28-201ENST00000451325 435 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 TRGVB-201ENST00000453257 471 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 NF1P3-201ENST00000457709 450 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC091564.1-201ENST00000464563 479 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC146507.1-201ENST00000468335 354 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 HMGB1P36-201ENST00000487709 576 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 RPL29P14-201ENST00000495837 428 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 MTCYBP17-201ENST00000503579 789 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC027309.2-201ENST00000520566 192 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC239860.2-201ENST00000525886 270 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AP002453.2-201ENST00000533503 320 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 DYNLL1P4-201ENST00000549314 266 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 MIR3913-1-201ENST00000577744 102 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AL451044.1-201ENST00000604867 238 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC080013.4-201ENST00000607624 649 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC092954.2-201ENST00000609103 430 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AL158196.1-201ENST00000616786 434 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AL023881.1-201ENST00000621088 301 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 CR381653.2-201ENST00000624041 768 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC026634.1-201ENST00000634369 198 ntBASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 AC099654.14-201ENST00000638599 341 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms