Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RN7SL172P-201ENST00000460535 303 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 RN7SL189P-201ENST00000468631 289 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC024558.1-201ENST00000505008 528 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 PGAM1P13-201ENST00000507497 754 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 SCARNA21.2-201ENST00000516600 166 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU6-273P-201ENST00000516937 96 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 Y_RNA.711-201ENST00000516993 102 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AP001804.3-201ENST00000525146 880 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AP000859.1-201ENST00000525536 307 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 LSM3P2-201ENST00000551246 273 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 MIR4424-201ENST00000585257 86 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC006116.10-201ENST00000591836 581 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC245389.1-201ENST00000605141 529 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC093838.1-201ENST00000613014 469 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNA5SP439-201ENST00000617595 124 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL136313.1-201ENST00000624804 202 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 MTCO1P12-201ENST00000414273 1543 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL122126.1-201ENST00000546905 1318 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC092747.4-201ENST00000620519 1861 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC093671.1-201ENST00000624981 2929 ntBASIC4.9□□□□□ -1.63
HLA-DQA1Q5Y7H0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC023421.1-201ENST00000590535 1785 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL139276.1-201ENST00000311910 1001 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU6-511P-201ENST00000363496 107 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNA5SP223-201ENST00000365174 120 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 Y_RNA.339-201ENST00000365325 102 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 Y_RNA.445-201ENST00000384168 102 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNA5SP241-201ENST00000391326 114 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU2-29P-201ENST00000410423 189 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 GPS2P1-201ENST00000411761 986 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL161631.1-201ENST00000417933 486 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL359265.2-201ENST00000434367 631 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 GAPDHP58-201ENST00000438477 1006 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 RPS29P10-201ENST00000439197 166 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 MTND1P9-201ENST00000453775 944 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 CBX1P2-201ENST00000453841 458 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 RPL10P17-201ENST00000453852 316 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 Z92846.1-201ENST00000456203 268 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL162395.1-201ENST00000457882 422 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU7-180P-201ENST00000459240 63 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC012181.1-201ENST00000479895 423 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 MTCO1P29-201ENST00000496868 288 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 COX7A2P2-201ENST00000505291 250 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 HMGB3P15-201ENST00000507326 574 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC016065.2-201ENST00000514530 444 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU6-864P-201ENST00000516256 108 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU7-51P-201ENST00000516560 62 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU6-798P-201ENST00000516912 103 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC124068.1-201ENST00000563131 678 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC016925.2-201ENST00000605108 242 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC124303.1-201ENST00000605703 360 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC113194.1-201ENST00000606037 500 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AP000843.1-201ENST00000624880 701 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC135068.12-201ENST00000637370 931 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC092070.2-203ENST00000598377 3644 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL450345.1-202ENST00000605741 3881 ntBASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1Q5Y7H0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1Q5Y7H0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms