Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.48□□□□□ -2.01
CCDC58Q4VC31 MTCO2P22-201ENST00000603246 681 ntBASIC2.48□□□□□ -2.01
CCDC58Q4VC31 BNIP3P11-201ENST00000603878 563 ntBASIC2.48□□□□□ -2.01
CCDC58Q4VC31 AL161756.2-201ENST00000604597 246 ntBASIC2.48□□□□□ -2.01
CCDC58Q4VC31 AC005046.1-201ENST00000608515 625 ntBASIC2.48□□□□□ -2.01
CCDC58Q4VC31 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC58Q4VC31 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC58Q4VC31 AC009501.3-201ENST00000605001 1352 ntBASIC2.48□□□□□ -2.01
CCDC58Q4VC31 MTCO1P12-201ENST00000414273 1543 ntBASIC2.47□□□□□ -2.01
CCDC58Q4VC31 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC58Q4VC31 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC58Q4VC31 AL139276.1-201ENST00000311910 1001 ntBASIC2.47□□□□□ -2.01
CCDC58Q4VC31 RNA5SP479-201ENST00000364858 117 ntBASIC2.47□□□□□ -2.01
CCDC58Q4VC31 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC58Q4VC31 SNORD65-201ENST00000391079 73 ntBASIC2.47□□□□□ -2.01
CCDC58Q4VC31 AL513175.2-201ENST00000422071 443 ntBASIC2.47□□□□□ -2.01
CCDC58Q4VC31 RPL32P34-201ENST00000486380 400 ntBASIC2.47□□□□□ -2.01
CCDC58Q4VC31 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC58Q4VC31 RN7SKP157-201ENST00000516174 282 ntBASIC2.47□□□□□ -2.01
CCDC58Q4VC31 AL133271.1-201ENST00000538229 291 ntBASIC2.47□□□□□ -2.01
CCDC58Q4VC31 ZNF861P-201ENST00000588126 639 ntBASIC2.47□□□□□ -2.01
CCDC58Q4VC31 AC060766.3-201ENST00000591442 263 ntBASIC2.47□□□□□ -2.01
CCDC58Q4VC31 MIR6895-201ENST00000613497 78 ntBASIC2.47□□□□□ -2.01
CCDC58Q4VC31 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC58Q4VC31 AC015967.1-201ENST00000619893 476 ntBASIC2.47□□□□□ -2.01
CCDC58Q4VC31 MIR3651-201ENST00000630427 90 ntBASIC2.47□□□□□ -2.01
CCDC58Q4VC31 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC58Q4VC31 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CCDC58Q4VC31 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC58Q4VC31 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC58Q4VC31 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
CCDC58Q4VC31 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 SNORA80E-201ENST00000384744 137 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 MIR183-201ENST00000384958 110 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 RPL31P20-201ENST00000449593 360 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 NIPA2P5-201ENST00000452282 464 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AC010285.1-201ENST00000470580 392 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AC083906.5-201ENST00000503722 328 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 WBP1LP4-201ENST00000505043 344 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 RAC1P5-201ENST00000512182 576 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AC008885.1-201ENST00000514930 301 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AC008277.2-201ENST00000605196 797 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 MIR7112-201ENST00000616126 65 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AL133370.2-201ENST00000619934 439 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AC020923.1-201ENST00000624021 917 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC58Q4VC31 U6.105-201ENST00000637379 88 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 ZNF37BP-203ENST00000452306 1352 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.46□□□□□ -2.02
CCDC58Q4VC31 AL122126.1-201ENST00000546905 1318 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 Y_RNA.62-201ENST00000362840 99 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 RNVU1-3-201ENST00000364313 161 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 SNORA48.5-201ENST00000391143 135 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 RPS20P25-201ENST00000412447 352 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AL050321.1-201ENST00000432363 400 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AL359073.1-201ENST00000448036 403 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 RPL37P3-201ENST00000456825 293 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 RPL5P13-201ENST00000462840 709 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 RPS3AP43-201ENST00000479743 781 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 VN1R104P-201ENST00000505115 1009 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 HMGB3P3-201ENST00000510526 400 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AC023632.4-201ENST00000517783 191 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AC087808.1-201ENST00000520501 361 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AP000790.1-201ENST00000528891 737 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AC007115.1-201ENST00000546853 234 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms