Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AC079395.3-201ENST00000615161 484 ntBASIC3.24□□□□□ -1.89
ANKRD55Q3KP44 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.24□□□□□ -1.89
ANKRD55Q3KP44 AL356863.1-201ENST00000623378 1080 ntBASIC3.24□□□□□ -1.89
ANKRD55Q3KP44 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.24□□□□□ -1.89
ANKRD55Q3KP44 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ANKRD55Q3KP44 TNPO1P3-201ENST00000436471 2662 ntBASIC3.24□□□□□ -1.89
ANKRD55Q3KP44 AL021368.2-201ENST00000606125 5352 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 MIR383-201ENST00000362257 73 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 Y_RNA.311-201ENST00000365068 96 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AL391417.1-201ENST00000404100 426 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AL008987.1-201ENST00000415528 237 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 HIGD1AP15-201ENST00000416198 280 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 RPS24P7-201ENST00000416921 246 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC127526.1-201ENST00000417526 366 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 YPEL5P1-201ENST00000419731 367 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 RPL21P32-201ENST00000419877 477 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AL137014.1-201ENST00000420490 1226 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AL139421.1-201ENST00000423010 169 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 ARF4P2-201ENST00000430209 526 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 MTCYBP31-201ENST00000438855 1122 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 RABEPKP1-201ENST00000440529 1026 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 MTND2P20-201ENST00000440805 661 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 RPL17P49-201ENST00000443728 411 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AL591719.1-201ENST00000444669 744 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 RPS29P31-201ENST00000446147 164 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 RPL39P6-201ENST00000448289 150 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC098824.1-201ENST00000453565 980 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AL136097.1-201ENST00000456945 913 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 BTF3P5-201ENST00000457252 467 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 RPL7P38-201ENST00000488396 739 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC002456.2-201ENST00000509356 380 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC099522.1-202ENST00000514718 367 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 RNU6-1095P-201ENST00000516148 108 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 RNY4P37-201ENST00000516225 96 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 MIR2116-201ENST00000517221 80 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC023575.1-201ENST00000580510 358 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC022022.2-201ENST00000602989 360 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AL109653.1-201ENST00000603091 248 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC025588.2-201ENST00000604851 466 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC106028.5-201ENST00000610332 395 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 MIR378J-201ENST00000611988 109 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AL110115.1-201ENST00000614396 364 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC114781.5-201ENST00000615297 108 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 MLECP1-201ENST00000615893 709 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AC011944.2-201ENST00000624440 683 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 MIR3653-201ENST00000625572 110 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 MIR6830-201ENST00000636015 70 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 U6.101-201ENST00000637707 76 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AP000776.1-201ENST00000530032 1663 ntBASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ANKRD55Q3KP44 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 RPL32P3-201ENST00000359025 275 ntBASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 SNORA60-201ENST00000362396 134 ntBASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 RNA5SP399-201ENST00000364003 117 ntBASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 SNORA70.2-201ENST00000364506 135 ntBASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 RNU6-1122P-201ENST00000384449 107 ntBASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 TAF9BP1-201ENST00000396646 746 ntBASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 RN7SKP53-201ENST00000411337 315 ntBASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 HIGD1AP4-201ENST00000430194 280 ntBASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 SNRPEP4-201ENST00000435815 279 ntBASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 MTND3P1-201ENST00000441336 220 ntBASIC3.22□□□□□ -1.89
ANKRD55Q3KP44 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms