Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 MTND3P20-201ENST00000407663 186 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 RNU4-78P-201ENST00000410940 126 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 RPS20P25-201ENST00000412447 352 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 AL445584.1-201ENST00000431451 330 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 AC091390.1-201ENST00000433904 331 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX1Q16384 AC092170.1-201ENST00000440211 356 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.62□□□□□ -1.99
SSX1Q16384 PDSS1P2-201ENST00000449397 678 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 HMGN2P13-201ENST00000476476 274 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 AL024509.2-201ENST00000493462 493 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 AC006499.5-201ENST00000505037 514 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.62□□□□□ -1.99
SSX1Q16384 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.62□□□□□ -1.99
SSX1Q16384 AC092593.2-201ENST00000513866 913 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX1Q16384 SNORA76.2-201ENST00000517095 137 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.62□□□□□ -1.99
SSX1Q16384 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.62□□□□□ -1.99
SSX1Q16384 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX1Q16384 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.62□□□□□ -1.99
SSX1Q16384 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.62□□□□□ -1.99
SSX1Q16384 ELOCP31-201ENST00000540463 467 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 AC107016.2-201ENST00000547968 190 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 AC084824.1-201ENST00000550917 1005 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.62□□□□□ -1.99
SSX1Q16384 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.62□□□□□ -1.99
SSX1Q16384 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX1Q16384 AL731537.2-201ENST00000561565 951 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX1Q16384 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX1Q16384 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.62□□□□□ -1.99
SSX1Q16384 AC010653.1-201ENST00000571108 881 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 AL669831.4-202ENST00000590817 238 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX1Q16384 AC006213.5-201ENST00000619673 288 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 AC068831.8-201ENST00000620171 435 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.62□□□□□ -1.99
SSX1Q16384 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.62□□□□□ -1.99
SSX1Q16384 AL034408.1-202ENST00000636088 415 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSX1Q16384 AC139713.2-210ENST00000641741 992 ntBASIC2.62□□□□□ -1.99
SSX1Q16384 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SSX1Q16384 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SSX1Q16384 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SSX1Q16384 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSX1Q16384 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
SSX1Q16384 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSX1Q16384 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.61□□□□□ -1.99
SSX1Q16384 RNU6-1181P-201ENST00000384191 106 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 RNU6-837P-201ENST00000391056 108 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 RNU4-47P-201ENST00000410876 114 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 UBE2V1P9-201ENST00000414760 368 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 MRPL50P2-201ENST00000416821 482 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 RPP40P1-201ENST00000426762 456 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 RPL36AP6-201ENST00000435770 321 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.61□□□□□ -1.99
SSX1Q16384 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SSX1Q16384 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.61□□□□□ -1.99
SSX1Q16384 RPL21P10-201ENST00000463521 490 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AC010285.1-201ENST00000470580 392 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.61□□□□□ -1.99
SSX1Q16384 MTCO3P35-201ENST00000485582 781 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AC068724.1-201ENST00000487100 792 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.61□□□□□ -1.99
SSX1Q16384 RNU6-416P-201ENST00000516265 103 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 RNU6-362P-201ENST00000516736 90 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.61□□□□□ -1.99
SSX1Q16384 TRMT10BP1-201ENST00000519377 943 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.61□□□□□ -1.99
SSX1Q16384 IGJP1-201ENST00000522682 475 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 OR4A45P-201ENST00000529954 901 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AP003385.6-201ENST00000531603 374 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AC007458.1-201ENST00000542812 373 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.61□□□□□ -1.99
SSX1Q16384 AC012182.1-201ENST00000570133 895 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.61□□□□□ -1.99
SSX1Q16384 MIR3922-201ENST00000585192 84 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.61□□□□□ -1.99
SSX1Q16384 AC103881.1-201ENST00000603476 538 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AC079791.1-201ENST00000605356 973 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AC012467.1-201ENST00000607740 256 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AC112503.2-201ENST00000609005 552 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AC002076.2-201ENST00000617362 122 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AC138932.5-201ENST00000617759 563 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AC006963.1-201ENST00000624003 1052 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AC009039.2-201ENST00000624524 529 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
SSX1Q16384 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSX1Q16384 AC008432.1-201ENST00000615912 1320 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.61□□□□□ -1.99
SSX1Q16384 MTND5P31-201ENST00000419366 1374 ntBASIC2.61□□□□□ -1.99
SSX1Q16384 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.6□□□□□ -1.99
SSX1Q16384 AL161431.1-201ENST00000618966 4205 ntBASIC2.6□□□□□ -1.99
SSX1Q16384 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SSX1Q16384 Z82195.2-201ENST00000612348 18351 ntBASIC2.6□□□□□ -1.99
SSX1Q16384 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
SSX1Q16384 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SSX1Q16384 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SSX1Q16384 RNA5SP515-201ENST00000364570 118 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms