Protein–RNA interactions for Protein: Q12996

CSTF3, Cleavage stimulation factor subunit 3, humanhuman

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3Q12996 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.92□□□□□ -1.78
CSTF3Q12996 AC055876.5-201ENST00000605667 259 ntBASIC3.92□□□□□ -1.78
CSTF3Q12996 AC103710.3-201ENST00000608157 948 ntBASIC3.92□□□□□ -1.78
CSTF3Q12996 MIR7151-201ENST00000617477 60 ntBASIC3.92□□□□□ -1.78
CSTF3Q12996 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.92□□□□□ -1.78
CSTF3Q12996 AC022079.1-201ENST00000621546 602 ntBASIC3.92□□□□□ -1.78
CSTF3Q12996 AC011944.2-201ENST00000624440 683 ntBASIC3.92□□□□□ -1.78
CSTF3Q12996 AC009039.2-201ENST00000624524 529 ntBASIC3.92□□□□□ -1.78
CSTF3Q12996 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.92□□□□□ -1.78
CSTF3Q12996 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.92□□□□□ -1.78
CSTF3Q12996 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CSTF3Q12996 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSTF3Q12996 HSPA8P1-201ENST00000425843 1833 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.91□□□□□ -1.78
CSTF3Q12996 RNU6-433P-201ENST00000363216 104 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 SNORD35B-201ENST00000363660 87 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 RNU6-777P-201ENST00000364265 104 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 RNU6-343P-201ENST00000364709 104 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.91□□□□□ -1.78
CSTF3Q12996 MIR1251-201ENST00000408552 70 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 Y_RNA.625-201ENST00000411256 107 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.91□□□□□ -1.78
CSTF3Q12996 AC092447.6-201ENST00000414578 210 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.91□□□□□ -1.78
CSTF3Q12996 AC245052.5-201ENST00000416320 649 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.91□□□□□ -1.78
CSTF3Q12996 AL159169.1-201ENST00000421119 127 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.91□□□□□ -1.78
CSTF3Q12996 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.91□□□□□ -1.78
CSTF3Q12996 AC016712.1-201ENST00000431088 378 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 AL358472.1-201ENST00000431295 329 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 AC011742.1-201ENST00000431448 434 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 AL590103.1-201ENST00000434488 307 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 MTCYBP45-201ENST00000435243 565 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.91□□□□□ -1.78
CSTF3Q12996 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.91□□□□□ -1.78
CSTF3Q12996 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.91□□□□□ -1.78
CSTF3Q12996 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.91□□□□□ -1.78
CSTF3Q12996 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.91□□□□□ -1.78
CSTF3Q12996 HMGB3P22-202ENST00000451823 572 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 RPL38P1-201ENST00000460914 211 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 RN7SL604P-201ENST00000492589 296 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 RPL31P61-201ENST00000496160 376 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 RPL7P47-201ENST00000497299 556 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSTF3Q12996 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.91□□□□□ -1.78
CSTF3Q12996 MTND5P4-201ENST00000514978 288 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.91□□□□□ -1.78
CSTF3Q12996 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.91□□□□□ -1.78
CSTF3Q12996 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.91□□□□□ -1.78
CSTF3Q12996 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSTF3Q12996 GNRHR2P1-201ENST00000555315 631 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.91□□□□□ -1.78
CSTF3Q12996 AC136618.2-201ENST00000575091 400 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 AC090615.1-201ENST00000577519 154 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
CSTF3Q12996 SNRPGP15-201ENST00000600149 222 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.91□□□□□ -1.78
CSTF3Q12996 AL163642.2-201ENST00000604722 1019 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 AC128687.1-201ENST00000605304 619 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 AC090186.1-201ENST00000605991 572 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 AC122133.1-201ENST00000613964 233 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 AC114781.5-201ENST00000615297 108 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 MIR3653-201ENST00000625572 110 ntBASIC3.91□□□□□ -1.78
CSTF3Q12996 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.91□□□□□ -1.78
CSTF3Q12996 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSTF3Q12996 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.91□□□□□ -1.78
CSTF3Q12996 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSTF3Q12996 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CSTF3Q12996 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.9□□□□□ -1.78
CSTF3Q12996 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.9□□□□□ -1.78
CSTF3Q12996 AC244517.1-201ENST00000606030 2086 ntBASIC3.9□□□□□ -1.78
CSTF3Q12996 RNU6-335P-201ENST00000364563 113 ntBASIC3.9□□□□□ -1.79
CSTF3Q12996 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.9□□□□□ -1.79
CSTF3Q12996 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CSTF3Q12996 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.9□□□□□ -1.79
CSTF3Q12996 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.9□□□□□ -1.79
CSTF3Q12996 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.9□□□□□ -1.79
CSTF3Q12996 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.9□□□□□ -1.79
CSTF3Q12996 AC009220.1-201ENST00000451614 275 ntBASIC3.9□□□□□ -1.79
CSTF3Q12996 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.9□□□□□ -1.79
CSTF3Q12996 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.9□□□□□ -1.79
CSTF3Q12996 RNU7-170P-201ENST00000459303 61 ntBASIC3.9□□□□□ -1.79
CSTF3Q12996 RPL9P32-201ENST00000464118 620 ntBASIC3.9□□□□□ -1.79
CSTF3Q12996 UQCRHP4-201ENST00000471686 272 ntBASIC3.9□□□□□ -1.79
CSTF3Q12996 AC007537.2-201ENST00000472093 511 ntBASIC3.9□□□□□ -1.79
CSTF3Q12996 ST13P14-201ENST00000474095 734 ntBASIC3.9□□□□□ -1.79
CSTF3Q12996 AC104563.1-201ENST00000476147 376 ntBASIC3.9□□□□□ -1.79
CSTF3Q12996 BET1P1-201ENST00000482276 359 ntBASIC3.9□□□□□ -1.79
CSTF3Q12996 AC069499.1-201ENST00000489433 509 ntBASIC3.9□□□□□ -1.79
CSTF3Q12996 RPS27AP13-201ENST00000498403 237 ntBASIC3.9□□□□□ -1.79
CSTF3Q12996 AC093809.1-201ENST00000509155 340 ntBASIC3.9□□□□□ -1.79
CSTF3Q12996 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CSTF3Q12996 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.9□□□□□ -1.79
CSTF3Q12996 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.9□□□□□ -1.79
CSTF3Q12996 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CSTF3Q12996 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.9□□□□□ -1.79
CSTF3Q12996 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.9□□□□□ -1.79
CSTF3Q12996 AP004371.1-201ENST00000525240 214 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms