Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SCN1BQ07699 AC091152.2-201ENST00000591628 2569 ntBASIC3.52□□□□□ -1.85
SCN1BQ07699 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCN1BQ07699 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.51□□□□□ -1.85
SCN1BQ07699 RPL7P26-201ENST00000333817 754 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 SNORD35B-201ENST00000363660 87 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 Y_RNA.548-201ENST00000384656 105 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 MIR184-201ENST00000384962 84 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 MIR493-201ENST00000385254 89 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 MIR591-201ENST00000385290 95 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 RPS3AP24-201ENST00000407896 734 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.51□□□□□ -1.85
SCN1BQ07699 RPL21P32-201ENST00000419877 477 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 ZYG11AP1-201ENST00000430329 837 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 AC024082.2-201ENST00000434771 238 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 AC073143.1-201ENST00000436316 395 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 MTCYBP31-201ENST00000438855 1122 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 AC109327.1-201ENST00000471666 403 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 RPL35P6-201ENST00000490024 372 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.51□□□□□ -1.85
SCN1BQ07699 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.51□□□□□ -1.85
SCN1BQ07699 COX6CP8-201ENST00000522620 226 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 AP001804.3-201ENST00000525146 880 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 AC022690.1-201ENST00000526681 550 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 TRAV8-5-201ENST00000537369 341 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.51□□□□□ -1.85
SCN1BQ07699 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.51□□□□□ -1.85
SCN1BQ07699 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.51□□□□□ -1.85
SCN1BQ07699 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.51□□□□□ -1.85
SCN1BQ07699 AC008962.1-201ENST00000605729 304 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 AC019193.2-201ENST00000610012 634 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SCN1BQ07699 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.51□□□□□ -1.85
SCN1BQ07699 AP000484.1-201ENST00000620067 1252 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 AP000346.3-201ENST00000622821 210 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 AC091905.1-201ENST00000624400 311 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 AL136164.4-201ENST00000625013 2135 ntBASIC3.51□□□□□ -1.85
SCN1BQ07699 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.51□□□□□ -1.85
SCN1BQ07699 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCN1BQ07699 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCN1BQ07699 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SCN1BQ07699 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCN1BQ07699 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.5□□□□□ -1.85
SCN1BQ07699 PWAR6-201ENST00000552334 4618 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SCN1BQ07699 RIOK3P1-201ENST00000418778 1528 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SCN1BQ07699 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SCN1BQ07699 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SCN1BQ07699 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SCN1BQ07699 AC009812.4-201ENST00000569134 1805 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SCN1BQ07699 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SCN1BQ07699 MIR585-201ENST00000384887 94 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 U3.22-201ENST00000391120 215 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 MTHFD2P2-201ENST00000407725 247 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.5□□□□□ -1.85
SCN1BQ07699 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.5□□□□□ -1.85
SCN1BQ07699 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.5□□□□□ -1.85
SCN1BQ07699 DNAJC19P7-201ENST00000428811 344 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.5□□□□□ -1.85
SCN1BQ07699 AL035246.1-201ENST00000433554 1255 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.5□□□□□ -1.85
SCN1BQ07699 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.5□□□□□ -1.85
SCN1BQ07699 EEF1E1P1-201ENST00000446998 430 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 OR6K5P-201ENST00000447050 945 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.5□□□□□ -1.85
SCN1BQ07699 MTND1P31-201ENST00000449206 961 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 AC010655.1-201ENST00000449336 292 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 NANOGP10-201ENST00000453325 895 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 AC234775.1-201ENST00000454247 670 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 AC011276.1-201ENST00000469688 323 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 RPL7P47-201ENST00000497299 556 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.5□□□□□ -1.85
SCN1BQ07699 ARL2BPP6-201ENST00000512757 439 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 RNU7-143P-201ENST00000516781 65 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 RPL12P22-201ENST00000519073 490 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 AC034205.1-201ENST00000520621 638 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.5□□□□□ -1.85
SCN1BQ07699 AC068831.4-201ENST00000556118 109 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 MTND4P33-201ENST00000556706 766 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 AC022968.1-201ENST00000567372 442 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 AC022655.2-201ENST00000577280 318 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 MIR4474-201ENST00000579189 78 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 MIR4425-201ENST00000580572 84 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.5□□□□□ -1.85
SCN1BQ07699 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.5□□□□□ -1.85
SCN1BQ07699 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.5□□□□□ -1.85
SCN1BQ07699 AL050303.3-201ENST00000613704 284 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 AC006213.4-201ENST00000616184 634 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 AC068831.7-201ENST00000616954 363 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 AL139089.1-201ENST00000620372 975 ntBASIC3.5□□□□□ -1.85
SCN1BQ07699 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.5□□□□□ -1.85
SCN1BQ07699 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SCN1BQ07699 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SCN1BQ07699 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.5□□□□□ -1.85
SCN1BQ07699 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SCN1BQ07699 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
SCN1BQ07699 AL513185.3-201ENST00000433335 1300 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms