Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC008280.2-201ENST00000455473 307 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 RPL23AP45-201ENST00000476406 468 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.14□□□□□ -2.07
TFF3Q07654 AC092436.1-201ENST00000506450 503 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 KLHL2P1-201ENST00000508691 521 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 AC034244.2-201ENST00000514668 858 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.14□□□□□ -2.07
TFF3Q07654 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.14□□□□□ -2.07
TFF3Q07654 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.14□□□□□ -2.07
TFF3Q07654 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TFF3Q07654 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
TFF3Q07654 RPL23AP84-201ENST00000571193 464 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 SNORA35B-201ENST00000607417 129 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
TFF3Q07654 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
TFF3Q07654 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.14□□□□□ -2.07
TFF3Q07654 AC007336.1-201ENST00000576365 3828 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 SEPT7P7-201ENST00000420492 1301 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TFF3Q07654 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.13□□□□□ -2.07
TFF3Q07654 MIR1289-2-201ENST00000408360 111 ntBASIC2.13□□□□□ -2.07
TFF3Q07654 AL096701.2-201ENST00000416920 238 ntBASIC2.13□□□□□ -2.07
TFF3Q07654 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.13□□□□□ -2.07
TFF3Q07654 RPS12P2-201ENST00000439728 269 ntBASIC2.13□□□□□ -2.07
TFF3Q07654 Z99127.2-201ENST00000441426 334 ntBASIC2.13□□□□□ -2.07
TFF3Q07654 AC099063.2-201ENST00000446360 662 ntBASIC2.13□□□□□ -2.07
TFF3Q07654 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.13□□□□□ -2.07
TFF3Q07654 PTGES3P5-201ENST00000455109 434 ntBASIC2.13□□□□□ -2.07
TFF3Q07654 RPL36AP51-201ENST00000487216 318 ntBASIC2.13□□□□□ -2.07
TFF3Q07654 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.13□□□□□ -2.07
TFF3Q07654 RPS27P27-201ENST00000498779 255 ntBASIC2.13□□□□□ -2.07
TFF3Q07654 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.13□□□□□ -2.07
TFF3Q07654 HMGB1P41-201ENST00000520234 440 ntBASIC2.13□□□□□ -2.07
TFF3Q07654 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TFF3Q07654 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.13□□□□□ -2.07
TFF3Q07654 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.13□□□□□ -2.07
TFF3Q07654 AC123904.3-201ENST00000547218 814 ntBASIC2.13□□□□□ -2.07
TFF3Q07654 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.13□□□□□ -2.07
TFF3Q07654 AC090312.2-201ENST00000582687 378 ntBASIC2.13□□□□□ -2.07
TFF3Q07654 AC046143.2-201ENST00000609789 160 ntBASIC2.13□□□□□ -2.07
TFF3Q07654 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
TFF3Q07654 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.13□□□□□ -2.07
TFF3Q07654 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TFF3Q07654 AC241585.2-209ENST00000638217 143 ntBASIC2.13□□□□□ -2.07
TFF3Q07654 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TFF3Q07654 RPL21P132-201ENST00000331267 462 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TFF3Q07654 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TFF3Q07654 MIR764-201ENST00000390811 85 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 RPS3AP26-201ENST00000398259 784 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 AL079342.1-201ENST00000401460 267 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 BTF3P7-201ENST00000407097 488 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 RAP1BP1-201ENST00000412709 553 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.12□□□□□ -2.07
TFF3Q07654 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.12□□□□□ -2.07
TFF3Q07654 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.12□□□□□ -2.07
TFF3Q07654 SETP8-201ENST00000435341 628 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.12□□□□□ -2.07
TFF3Q07654 AC104389.3-201ENST00000445629 235 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.12□□□□□ -2.07
TFF3Q07654 RNA5SP281-201ENST00000516504 135 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 AC021269.2-201ENST00000532318 330 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.12□□□□□ -2.07
TFF3Q07654 AL442163.2-201ENST00000553912 710 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TFF3Q07654 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.12□□□□□ -2.07
TFF3Q07654 ABI1P1-201ENST00000603375 1120 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TFF3Q07654 MIR1291-201ENST00000627649 87 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 DCAF13P3-201ENST00000561147 1334 ntBASIC2.12□□□□□ -2.07
TFF3Q07654 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.11□□□□□ -2.07
TFF3Q07654 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TFF3Q07654 MTND5P6-201ENST00000422338 1798 ntBASIC2.11□□□□□ -2.07
TFF3Q07654 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.11□□□□□ -2.07
TFF3Q07654 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.11□□□□□ -2.07
TFF3Q07654 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.11□□□□□ -2.07
TFF3Q07654 AC096638.1-201ENST00000444678 216 ntBASIC2.11□□□□□ -2.07
TFF3Q07654 IFNA11P-201ENST00000446352 526 ntBASIC2.11□□□□□ -2.07
TFF3Q07654 AC027673.1-201ENST00000456245 405 ntBASIC2.11□□□□□ -2.07
TFF3Q07654 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.11□□□□□ -2.07
TFF3Q07654 AC126182.1-201ENST00000478134 357 ntBASIC2.11□□□□□ -2.07
TFF3Q07654 AC098799.2-201ENST00000509466 868 ntBASIC2.11□□□□□ -2.07
TFF3Q07654 MTND5P4-201ENST00000514978 288 ntBASIC2.11□□□□□ -2.07
TFF3Q07654 DEFB122-202ENST00000569013 197 ntBASIC2.11□□□□□ -2.07
TFF3Q07654 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.11□□□□□ -2.07
TFF3Q07654 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.11□□□□□ -2.07
TFF3Q07654 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.11□□□□□ -2.07
TFF3Q07654 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.11□□□□□ -2.07
TFF3Q07654 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.11□□□□□ -2.07
TFF3Q07654 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.11□□□□□ -2.07
TFF3Q07654 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TFF3Q07654 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TFF3Q07654 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.1□□□□□ -2.07
TFF3Q07654 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TFF3Q07654 AL024474.1-201ENST00000404655 591 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.1□□□□□ -2.07
TFF3Q07654 RAD23BP2-201ENST00000416003 1207 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TFF3Q07654 AL591806.2-201ENST00000433122 173 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms