Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 HSFY3P-201ENST00000444242 1191 ntBASIC1.99□□□□□ -2.09
SSBP1Q04837 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.99□□□□□ -2.09
SSBP1Q04837 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC1.99□□□□□ -2.09
SSBP1Q04837 NCOR1P1-202ENST00000486162 291 ntBASIC1.99□□□□□ -2.09
SSBP1Q04837 LINC00888-204ENST00000487386 421 ntBASIC1.99□□□□□ -2.09
SSBP1Q04837 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.99□□□□□ -2.09
SSBP1Q04837 AC006445.2-201ENST00000510061 472 ntBASIC1.99□□□□□ -2.09
SSBP1Q04837 RN7SKP24-201ENST00000515888 284 ntBASIC1.99□□□□□ -2.09
SSBP1Q04837 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.99□□□□□ -2.09
SSBP1Q04837 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SSBP1Q04837 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.99□□□□□ -2.09
SSBP1Q04837 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC1.99□□□□□ -2.09
SSBP1Q04837 AC079600.2-201ENST00000550076 130 ntBASIC1.99□□□□□ -2.09
SSBP1Q04837 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.99□□□□□ -2.09
SSBP1Q04837 AL391156.1-201ENST00000554965 554 ntBASIC1.99□□□□□ -2.09
SSBP1Q04837 AL109653.1-201ENST00000603091 248 ntBASIC1.99□□□□□ -2.09
SSBP1Q04837 AL391834.1-201ENST00000609609 560 ntBASIC1.99□□□□□ -2.09
SSBP1Q04837 MIR6748-201ENST00000610433 71 ntBASIC1.99□□□□□ -2.09
SSBP1Q04837 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC1.99□□□□□ -2.09
SSBP1Q04837 ATP5A1P2-202ENST00000616464 443 ntBASIC1.99□□□□□ -2.09
SSBP1Q04837 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.99□□□□□ -2.09
SSBP1Q04837 AL365361.1-201ENST00000566942 3481 ntBASIC1.99□□□□□ -2.09
SSBP1Q04837 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.99□□□□□ -2.09
SSBP1Q04837 MTND4P1-201ENST00000457501 1466 ntBASIC1.99□□□□□ -2.09
SSBP1Q04837 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.99□□□□□ -2.09
SSBP1Q04837 AL136164.4-201ENST00000625013 2135 ntBASIC1.99□□□□□ -2.09
SSBP1Q04837 MTCO1P6-201ENST00000481192 1384 ntBASIC1.98□□□□□ -2.09
SSBP1Q04837 MTND5P3-201ENST00000438536 1800 ntBASIC1.98□□□□□ -2.09
SSBP1Q04837 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSBP1Q04837 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SSBP1Q04837 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.98□□□□□ -2.09
SSBP1Q04837 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSBP1Q04837 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSBP1Q04837 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSBP1Q04837 RNA5SP479-201ENST00000364858 117 ntBASIC1.98□□□□□ -2.09
SSBP1Q04837 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SSBP1Q04837 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSBP1Q04837 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SSBP1Q04837 HSPE1P1-201ENST00000421494 318 ntBASIC1.98□□□□□ -2.09
SSBP1Q04837 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC1.98□□□□□ -2.09
SSBP1Q04837 AC244033.1-201ENST00000426826 870 ntBASIC1.98□□□□□ -2.09
SSBP1Q04837 AC091390.1-201ENST00000433904 331 ntBASIC1.98□□□□□ -2.09
SSBP1Q04837 ARL5AP2-201ENST00000444698 533 ntBASIC1.98□□□□□ -2.09
SSBP1Q04837 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC1.98□□□□□ -2.09
SSBP1Q04837 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.98□□□□□ -2.09
SSBP1Q04837 GZMAP1-201ENST00000503054 631 ntBASIC1.98□□□□□ -2.09
SSBP1Q04837 RNA5SP341-201ENST00000516261 117 ntBASIC1.98□□□□□ -2.09
SSBP1Q04837 RNA5SP82-201ENST00000516707 92 ntBASIC1.98□□□□□ -2.09
SSBP1Q04837 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.98□□□□□ -2.09
SSBP1Q04837 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC1.98□□□□□ -2.09
SSBP1Q04837 MIR5694-201ENST00000581190 76 ntBASIC1.98□□□□□ -2.09
SSBP1Q04837 AC084373.1-201ENST00000603311 235 ntBASIC1.98□□□□□ -2.09
SSBP1Q04837 HMGN2P28-201ENST00000606102 262 ntBASIC1.98□□□□□ -2.09
SSBP1Q04837 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSBP1Q04837 MIR6895-201ENST00000613497 78 ntBASIC1.98□□□□□ -2.09
SSBP1Q04837 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.98□□□□□ -2.09
SSBP1Q04837 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.98□□□□□ -2.09
SSBP1Q04837 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.98□□□□□ -2.09
SSBP1Q04837 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SSBP1Q04837 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SSBP1Q04837 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC1.97□□□□□ -2.09
SSBP1Q04837 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
SSBP1Q04837 SNORD56.5-201ENST00000364281 72 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 RNVU1-14-201ENST00000384770 164 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 AL139039.1-201ENST00000401900 692 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 MTND1P23-201ENST00000416931 372 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.97□□□□□ -2.09
SSBP1Q04837 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.97□□□□□ -2.09
SSBP1Q04837 UBBP3-201ENST00000445497 241 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 RPL7P52-201ENST00000449200 742 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 RPL21P104-201ENST00000464143 478 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 AC093663.2-201ENST00000484625 313 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SSBP1Q04837 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SSBP1Q04837 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 OR4R1P-201ENST00000529879 463 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.97□□□□□ -2.09
SSBP1Q04837 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SSBP1Q04837 MIR4697-201ENST00000582977 78 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.97□□□□□ -2.09
SSBP1Q04837 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.97□□□□□ -2.09
SSBP1Q04837 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC1.97□□□□□ -2.09
SSBP1Q04837 AC008739.3-201ENST00000603262 127 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 AC069304.3-201ENST00000603938 1084 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 MIR6766-201ENST00000622641 72 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.97□□□□□ -2.09
SSBP1Q04837 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SSBP1Q04837 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SSBP1Q04837 AL049780.3-201ENST00000624612 1583 ntBASIC1.97□□□□□ -2.09
SSBP1Q04837 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.96□□□□□ -2.09
SSBP1Q04837 AC069528.2-201ENST00000624849 1991 ntBASIC1.96□□□□□ -2.1
SSBP1Q04837 PABPC1P9-201ENST00000426076 1612 ntBASIC1.96□□□□□ -2.1
SSBP1Q04837 AL139276.1-201ENST00000311910 1001 ntBASIC1.96□□□□□ -2.1
SSBP1Q04837 SNORA7.2-201ENST00000364446 145 ntBASIC1.96□□□□□ -2.1
SSBP1Q04837 MIR7-3-201ENST00000384898 110 ntBASIC1.96□□□□□ -2.1
SSBP1Q04837 RNU1-101P-201ENST00000391171 127 ntBASIC1.96□□□□□ -2.1
SSBP1Q04837 RPS4XP7-201ENST00000406274 780 ntBASIC1.96□□□□□ -2.1
SSBP1Q04837 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC1.96□□□□□ -2.1
SSBP1Q04837 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.96□□□□□ -2.1
SSBP1Q04837 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms