Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX6-1P78426 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
NKX6-1P78426 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX6-1P78426 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX6-1P78426 ATP5J2P6-201ENST00000565203 266 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 AC091042.1-201ENST00000579213 173 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 MIR3667-201ENST00000581025 74 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 AL020997.2-201ENST00000602607 184 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 AC105254.2-201ENST00000603636 436 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 AL158211.4-201ENST00000606988 584 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 AL391813.2-201ENST00000609113 322 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 AC090517.2-201ENST00000614966 680 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX6-1P78426 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX6-1P78426 LRRC77P-213ENST00000637727 880 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX6-1P78426 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX6-1P78426 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
NKX6-1P78426 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX6-1P78426 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX6-1P78426 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NKX6-1P78426 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX6-1P78426 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX6-1P78426 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NKX6-1P78426 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX6-1P78426 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
NKX6-1P78426 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NKX6-1P78426 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
NKX6-1P78426 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX6-1P78426 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NKX6-1P78426 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
NKX6-1P78426 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX6-1P78426 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX6-1P78426 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NKX6-1P78426 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX6-1P78426 SNORA66-201ENST00000384792 133 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 MTCO3P40-201ENST00000392516 676 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 BTF3P7-201ENST00000407097 488 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 RPL12P9-201ENST00000412942 488 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 ELOCP4-201ENST00000420090 333 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 RPL7P57-201ENST00000423238 740 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 USP9YP18-201ENST00000425912 695 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 AC002486.1-201ENST00000435098 391 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.36□□□□□ -1.71
NKX6-1P78426 FTH1P1-201ENST00000437933 532 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX6-1P78426 MTATP6P30-201ENST00000443540 664 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 AL031584.1-201ENST00000447169 754 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 AC010655.1-201ENST00000449336 292 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.36□□□□□ -1.71
NKX6-1P78426 RNU7-59P-201ENST00000459101 61 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 RN7SL441P-201ENST00000492388 296 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
NKX6-1P78426 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX6-1P78426 AC011352.1-201ENST00000512300 793 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.36□□□□□ -1.71
NKX6-1P78426 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX6-1P78426 FAM92A1P1-201ENST00000528023 890 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 AC022882.1-201ENST00000532142 501 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.36□□□□□ -1.71
NKX6-1P78426 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.36□□□□□ -1.71
NKX6-1P78426 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.36□□□□□ -1.71
NKX6-1P78426 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX6-1P78426 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX6-1P78426 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.36□□□□□ -1.71
NKX6-1P78426 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX6-1P78426 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.36□□□□□ -1.71
NKX6-1P78426 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX6-1P78426 AC008277.2-201ENST00000605196 797 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX6-1P78426 AC019193.2-201ENST00000610012 634 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 AL590282.1-201ENST00000610379 1136 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NKX6-1P78426 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
NKX6-1P78426 AC244258.1-201ENST00000637553 1071 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NKX6-1P78426 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX6-1P78426 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX6-1P78426 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NKX6-1P78426 AC090337.1-201ENST00000579651 2074 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 AL138713.1-201ENST00000624026 2130 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX6-1P78426 ELF2P3-201ENST00000445099 1506 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NKX6-1P78426 AC087190.4-201ENST00000574616 8334 ntBASIC4.36□□□□□ -1.71
NKX6-1P78426 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NKX6-1P78426 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.35□□□□□ -1.71
NKX6-1P78426 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NKX6-1P78426 AC074029.4-201ENST00000624796 1859 ntBASIC4.35□□□□□ -1.71
NKX6-1P78426 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
NKX6-1P78426 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NKX6-1P78426 SNORA70.2-201ENST00000364506 135 ntBASIC4.35□□□□□ -1.71
NKX6-1P78426 U3.15-201ENST00000365398 212 ntBASIC4.35□□□□□ -1.71
NKX6-1P78426 RNU6-1103P-201ENST00000384150 107 ntBASIC4.35□□□□□ -1.71
NKX6-1P78426 MIR19A-201ENST00000384878 82 ntBASIC4.35□□□□□ -1.71
NKX6-1P78426 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NKX6-1P78426 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NKX6-1P78426 SNORA77-201ENST00000408716 125 ntBASIC4.35□□□□□ -1.71
NKX6-1P78426 RNU6-712P-201ENST00000410558 100 ntBASIC4.35□□□□□ -1.71
NKX6-1P78426 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms