Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 OR5BE1P-202ENST00000641168 1176 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HDAC4P56524 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.19□□□□□ -1.74
HDAC4P56524 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
HDAC4P56524 OTUD4P1-201ENST00000237841 3067 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.19□□□□□ -1.74
HDAC4P56524 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HDAC4P56524 OR5BR1P-201ENST00000524992 1330 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HDAC4P56524 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HDAC4P56524 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.18□□□□□ -1.74
HDAC4P56524 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.18□□□□□ -1.74
HDAC4P56524 Z82217.1-201ENST00000625157 8149 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HDAC4P56524 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HDAC4P56524 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HDAC4P56524 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HDAC4P56524 RNA5SP322-201ENST00000363617 119 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 SNORA4.1-201ENST00000364263 144 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.18□□□□□ -1.74
HDAC4P56524 RPS26P8-201ENST00000393490 348 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 AC009237.5-201ENST00000414271 501 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.18□□□□□ -1.74
HDAC4P56524 RPL36AP36-201ENST00000418616 301 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 AC005517.2-201ENST00000424673 553 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.18□□□□□ -1.74
HDAC4P56524 TBCAP1-201ENST00000436520 327 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.18□□□□□ -1.74
HDAC4P56524 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.18□□□□□ -1.74
HDAC4P56524 RPL26P28-201ENST00000451325 435 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.18□□□□□ -1.74
HDAC4P56524 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.18□□□□□ -1.74
HDAC4P56524 HMGB3P30-201ENST00000457863 606 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 RPL7L1P8-201ENST00000469911 741 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.18□□□□□ -1.74
HDAC4P56524 MTCYBP17-201ENST00000503579 789 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 AC005178.1-201ENST00000508392 440 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 AC093281.2-201ENST00000510153 597 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.18□□□□□ -1.74
HDAC4P56524 OR5BM1P-201ENST00000512021 366 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.18□□□□□ -1.74
HDAC4P56524 RNU6-583P-201ENST00000516012 92 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.18□□□□□ -1.74
HDAC4P56524 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HDAC4P56524 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.18□□□□□ -1.74
HDAC4P56524 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.18□□□□□ -1.74
HDAC4P56524 AC122133.1-201ENST00000613964 233 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 AC009090.3-201ENST00000616553 565 ntBASIC4.18□□□□□ -1.74
HDAC4P56524 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.18□□□□□ -1.74
HDAC4P56524 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.18□□□□□ -1.74
HDAC4P56524 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.18□□□□□ -1.74
HDAC4P56524 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HDAC4P56524 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HDAC4P56524 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HDAC4P56524 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.18□□□□□ -1.74
HDAC4P56524 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.18□□□□□ -1.74
HDAC4P56524 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HDAC4P56524 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HDAC4P56524 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HDAC4P56524 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.17□□□□□ -1.74
HDAC4P56524 RLIMP1-201ENST00000339626 1680 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.17□□□□□ -1.74
HDAC4P56524 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
HDAC4P56524 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HDAC4P56524 RNA5SP399-201ENST00000364003 117 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HDAC4P56524 RNU6-328P-201ENST00000390887 106 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 SNRPEP2-201ENST00000397592 279 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HDAC4P56524 AL021407.1-201ENST00000404531 386 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 RHEBP3-201ENST00000411920 351 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 MTCYBP24-201ENST00000420387 1106 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.17□□□□□ -1.74
HDAC4P56524 AC011742.1-201ENST00000431448 434 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.17□□□□□ -1.74
HDAC4P56524 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.17□□□□□ -1.74
HDAC4P56524 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HDAC4P56524 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.17□□□□□ -1.74
HDAC4P56524 AC118469.1-201ENST00000442943 488 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 AC114755.5-201ENST00000447760 831 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 AC104073.1-201ENST00000451988 151 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.17□□□□□ -1.74
HDAC4P56524 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.17□□□□□ -1.74
HDAC4P56524 MTCO3P11-201ENST00000455103 774 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 RPS7P7-201ENST00000463499 571 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 AL132838.2-201ENST00000492041 314 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.17□□□□□ -1.74
HDAC4P56524 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.17□□□□□ -1.74
HDAC4P56524 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.17□□□□□ -1.74
HDAC4P56524 SAP18P1-201ENST00000512058 390 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.17□□□□□ -1.74
HDAC4P56524 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.17□□□□□ -1.74
HDAC4P56524 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.17□□□□□ -1.74
HDAC4P56524 OR4A45P-201ENST00000529954 901 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.17□□□□□ -1.74
HDAC4P56524 OR7K1P-201ENST00000546439 926 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.17□□□□□ -1.74
HDAC4P56524 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.17□□□□□ -1.74
HDAC4P56524 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.17□□□□□ -1.74
HDAC4P56524 MIR3915-201ENST00000578518 97 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms