Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RPL35AP22-201ENST00000436855 335 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.27□□□□□ -1.73
SUMO3P55854 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.27□□□□□ -1.73
SUMO3P55854 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.27□□□□□ -1.73
SUMO3P55854 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.27□□□□□ -1.73
SUMO3P55854 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.27□□□□□ -1.73
SUMO3P55854 TPT1P14-201ENST00000448018 505 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 AC234775.1-201ENST00000454247 670 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 MTND1P12-201ENST00000455231 147 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 AL359385.1-201ENST00000456509 365 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 MTCO2P29-201ENST00000465212 189 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.27□□□□□ -1.73
SUMO3P55854 RPL9P6-201ENST00000492764 598 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 RPL36AP41-201ENST00000493820 306 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.27□□□□□ -1.73
SUMO3P55854 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.27□□□□□ -1.73
SUMO3P55854 AC108078.1-201ENST00000508073 725 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.27□□□□□ -1.73
SUMO3P55854 RNU6-506P-201ENST00000516553 94 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 Vault.3-201ENST00000516676 95 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.27□□□□□ -1.73
SUMO3P55854 DEFB108A-201ENST00000530110 222 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.27□□□□□ -1.73
SUMO3P55854 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.27□□□□□ -1.73
SUMO3P55854 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.27□□□□□ -1.73
SUMO3P55854 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.27□□□□□ -1.73
SUMO3P55854 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.27□□□□□ -1.73
SUMO3P55854 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.27□□□□□ -1.73
SUMO3P55854 OR4T1P-201ENST00000554933 911 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.27□□□□□ -1.73
SUMO3P55854 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.27□□□□□ -1.73
SUMO3P55854 AC136619.2-201ENST00000563361 631 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 AL121834.1-201ENST00000572284 509 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 OR4K8P-201ENST00000578842 1048 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.27□□□□□ -1.73
SUMO3P55854 MIR3936-201ENST00000584304 110 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.27□□□□□ -1.73
SUMO3P55854 AC007038.2-201ENST00000608095 740 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 FAM25E-202ENST00000608562 189 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 AL161734.1-201ENST00000609720 557 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 AL133173.2-201ENST00000614270 90 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 MIR6853-201ENST00000619642 74 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 AC068880.5-201ENST00000624331 290 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SUMO3P55854 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.27□□□□□ -1.73
SUMO3P55854 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SUMO3P55854 A2MP1-204ENST00000566278 4130 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SUMO3P55854 AL391684.1-202ENST00000641293 1636 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SUMO3P55854 AC139713.2-215ENST00000641428 5037 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.27□□□□□ -1.73
SUMO3P55854 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SUMO3P55854 AC007390.2-201ENST00000606229 3803 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.27□□□□□ -1.73
SUMO3P55854 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SUMO3P55854 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
SUMO3P55854 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.26□□□□□ -1.73
SUMO3P55854 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SUMO3P55854 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SUMO3P55854 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.26□□□□□ -1.73
SUMO3P55854 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SUMO3P55854 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SUMO3P55854 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SUMO3P55854 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SUMO3P55854 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SUMO3P55854 NEAT1-202ENST00000501122 22743 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SUMO3P55854 RNU5E-1-201ENST00000362477 120 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 RNU5A-8P-201ENST00000364102 114 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 SNORA71.2-201ENST00000364941 134 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SUMO3P55854 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SUMO3P55854 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.26□□□□□ -1.73
SUMO3P55854 RNU6-637P-201ENST00000384050 107 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 RNU6-754P-201ENST00000391166 107 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SUMO3P55854 SDHCP2-201ENST00000398565 501 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 OR4K11P-201ENST00000431829 904 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 AC119618.1-201ENST00000434191 222 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 AC104850.1-201ENST00000435940 476 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.26□□□□□ -1.73
SUMO3P55854 AC093156.1-201ENST00000440382 670 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 USP9YP15-201ENST00000442391 422 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.26□□□□□ -1.73
SUMO3P55854 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.26□□□□□ -1.73
SUMO3P55854 AC093392.2-201ENST00000450682 337 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 AC108059.3-201ENST00000456388 214 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 AL445433.1-201ENST00000457507 257 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SUMO3P55854 RNU7-59P-201ENST00000459101 61 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 AK3P4-201ENST00000504283 583 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.26□□□□□ -1.73
SUMO3P55854 HMGN1P28-201ENST00000521340 364 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 OR5G4P-201ENST00000525251 760 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.26□□□□□ -1.73
SUMO3P55854 ZNF519P2-201ENST00000557032 169 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.26□□□□□ -1.73
SUMO3P55854 AC079075.1-201ENST00000559543 878 ntBASIC4.26□□□□□ -1.73
SUMO3P55854 AC105129.1-201ENST00000560250 297 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms