Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 FABP5P12-201ENST00000515543 389 ntBASIC3.17□□□□□ -1.9
LIM2P55344 SNORA48.10-201ENST00000516965 160 ntBASIC3.17□□□□□ -1.9
LIM2P55344 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LIM2P55344 AP001189.2-201ENST00000527320 189 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.17□□□□□ -1.9
LIM2P55344 AP000619.3-201ENST00000535634 1127 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.17□□□□□ -1.9
LIM2P55344 AC091515.1-201ENST00000548110 679 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AL389895.1-201ENST00000554127 252 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AC005476.1-201ENST00000554427 397 ntBASIC3.17□□□□□ -1.9
LIM2P55344 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.17□□□□□ -1.9
LIM2P55344 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.17□□□□□ -1.9
LIM2P55344 VN1R79P-201ENST00000593540 513 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AL035411.2-201ENST00000604022 421 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AC091946.2-201ENST00000606105 291 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AC009237.15-201ENST00000610252 501 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AC024257.5-201ENST00000612739 531 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AL354976.1-201ENST00000613843 387 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AC023158.2-201ENST00000614876 543 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AL121895.2-201ENST00000619558 447 ntBASIC3.17□□□□□ -1.9
LIM2P55344 AL356321.1-201ENST00000621360 228 ntBASIC3.17□□□□□ -1.9
LIM2P55344 MKKS-204ENST00000639674 192 ntBASIC3.17□□□□□ -1.9
LIM2P55344 ZNF663P-202ENST00000641770 1131 ntBASIC3.17□□□□□ -1.9
LIM2P55344 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LIM2P55344 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LIM2P55344 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.17□□□□□ -1.9
LIM2P55344 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
LIM2P55344 AL353746.1-201ENST00000566293 6881 ntBASIC3.17□□□□□ -1.9
LIM2P55344 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.17□□□□□ -1.9
LIM2P55344 AP001486.2-201ENST00000561652 5113 ntBASIC3.17□□□□□ -1.9
LIM2P55344 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.17□□□□□ -1.9
LIM2P55344 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LIM2P55344 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LIM2P55344 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LIM2P55344 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.16□□□□□ -1.9
LIM2P55344 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.16□□□□□ -1.9
LIM2P55344 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LIM2P55344 AC008725.1-201ENST00000605123 2263 ntBASIC3.16□□□□□ -1.9
LIM2P55344 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LIM2P55344 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LIM2P55344 MIR7-3-201ENST00000384898 110 ntBASIC3.16□□□□□ -1.9
LIM2P55344 MT-TC-201ENST00000387405 66 ntBASIC3.16□□□□□ -1.9
LIM2P55344 RNA5SP171-201ENST00000391071 115 ntBASIC3.16□□□□□ -1.9
LIM2P55344 MIR1183-201ENST00000408856 89 ntBASIC3.16□□□□□ -1.9
LIM2P55344 AL136133.1-201ENST00000413694 376 ntBASIC3.16□□□□□ -1.9
LIM2P55344 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.16□□□□□ -1.9
LIM2P55344 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.16□□□□□ -1.9
LIM2P55344 LUZP4P1-201ENST00000415420 344 ntBASIC3.16□□□□□ -1.9
LIM2P55344 OR1AA1P-201ENST00000419597 916 ntBASIC3.16□□□□□ -1.9
LIM2P55344 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.16□□□□□ -1.9
LIM2P55344 AC244098.2-201ENST00000422068 99 ntBASIC3.16□□□□□ -1.9
LIM2P55344 MTCO3P1-205ENST00000422088 832 ntBASIC3.16□□□□□ -1.9
LIM2P55344 AL389915.1-201ENST00000422463 466 ntBASIC3.16□□□□□ -1.9
LIM2P55344 RAC1P8-201ENST00000427086 527 ntBASIC3.16□□□□□ -1.9
LIM2P55344 AC006548.1-201ENST00000427470 102 ntBASIC3.16□□□□□ -1.9
LIM2P55344 YME1L1P1-201ENST00000429435 297 ntBASIC3.16□□□□□ -1.9
LIM2P55344 AC097713.2-201ENST00000430199 356 ntBASIC3.16□□□□□ -1.9
LIM2P55344 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.16□□□□□ -1.9
LIM2P55344 SEPT7P5-201ENST00000434048 306 ntBASIC3.16□□□□□ -1.9
LIM2P55344 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.16□□□□□ -1.9
LIM2P55344 PRDX3P3-201ENST00000447765 522 ntBASIC3.16□□□□□ -1.9
LIM2P55344 COX6CP18-201ENST00000448769 222 ntBASIC3.16□□□□□ -1.9
LIM2P55344 RPS20P32-201ENST00000456044 356 ntBASIC3.16□□□□□ -1.9
LIM2P55344 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.16□□□□□ -1.9
LIM2P55344 AC010468.1-201ENST00000461022 817 ntBASIC3.16□□□□□ -1.9
LIM2P55344 SYPL1P1-201ENST00000473622 768 ntBASIC3.16□□□□□ -1.9
LIM2P55344 RPL23AP44-201ENST00000482216 473 ntBASIC3.16□□□□□ -1.9
LIM2P55344 RPL21P13-201ENST00000488305 481 ntBASIC3.16□□□□□ -1.9
LIM2P55344 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.16□□□□□ -1.9
LIM2P55344 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.16□□□□□ -1.9
LIM2P55344 AC005921.1-201ENST00000510589 286 ntBASIC3.16□□□□□ -1.9
LIM2P55344 MTCYBP37-201ENST00000510642 1133 ntBASIC3.16□□□□□ -1.9
LIM2P55344 APOOP4-201ENST00000513530 597 ntBASIC3.16□□□□□ -1.9
LIM2P55344 AC021451.1-201ENST00000523498 1129 ntBASIC3.16□□□□□ -1.9
LIM2P55344 AC011611.1-201ENST00000552179 197 ntBASIC3.16□□□□□ -1.9
LIM2P55344 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
LIM2P55344 NCAPGP2-201ENST00000557911 754 ntBASIC3.16□□□□□ -1.9
LIM2P55344 AC107954.1-201ENST00000565906 727 ntBASIC3.16□□□□□ -1.9
LIM2P55344 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.16□□□□□ -1.9
LIM2P55344 AC015917.1-201ENST00000579654 510 ntBASIC3.16□□□□□ -1.9
LIM2P55344 MIR4276-201ENST00000584832 70 ntBASIC3.16□□□□□ -1.9
LIM2P55344 AC010928.3-201ENST00000587712 541 ntBASIC3.16□□□□□ -1.9
LIM2P55344 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.16□□□□□ -1.9
LIM2P55344 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.16□□□□□ -1.9
LIM2P55344 AC091057.3-201ENST00000602684 733 ntBASIC3.16□□□□□ -1.9
LIM2P55344 AC024933.1-201ENST00000608472 348 ntBASIC3.16□□□□□ -1.9
LIM2P55344 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.16□□□□□ -1.9
LIM2P55344 CR381572.1-201ENST00000625098 102 ntBASIC3.16□□□□□ -1.9
LIM2P55344 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LIM2P55344 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LIM2P55344 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LIM2P55344 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LIM2P55344 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LIM2P55344 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.16□□□□□ -1.9
LIM2P55344 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LIM2P55344 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
LIM2P55344 AC007496.3-201ENST00000624987 3443 ntBASIC3.15□□□□□ -1.9
LIM2P55344 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
LIM2P55344 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LIM2P55344 snoZ40.1-201ENST00000364540 72 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms