Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 PTP4A1P6-201ENST00000531034 478 ntBASIC3.62□□□□□ -1.83
CDH11P55287 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH11P55287 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH11P55287 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.62□□□□□ -1.83
CDH11P55287 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH11P55287 AC106785.1-201ENST00000565935 262 ntBASIC3.62□□□□□ -1.83
CDH11P55287 AC025627.2-201ENST00000576220 160 ntBASIC3.62□□□□□ -1.83
CDH11P55287 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH11P55287 MIR3915-201ENST00000578518 97 ntBASIC3.62□□□□□ -1.83
CDH11P55287 MIR1254-2-201ENST00000579553 63 ntBASIC3.62□□□□□ -1.83
CDH11P55287 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH11P55287 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH11P55287 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH11P55287 WISP1-OT1-201ENST00000602893 642 ntBASIC3.62□□□□□ -1.83
CDH11P55287 MIR6867-201ENST00000610636 67 ntBASIC3.62□□□□□ -1.83
CDH11P55287 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CDH11P55287 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CDH11P55287 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH11P55287 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH11P55287 AC099063.3-201ENST00000642066 185 ntBASIC3.62□□□□□ -1.83
CDH11P55287 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH11P55287 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.62□□□□□ -1.83
CDH11P55287 AL445523.1-201ENST00000451184 1362 ntBASIC3.62□□□□□ -1.83
CDH11P55287 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH11P55287 AP002907.1-201ENST00000606361 1430 ntBASIC3.61□□□□□ -1.83
CDH11P55287 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH11P55287 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CDH11P55287 OR11H4-201ENST00000315409 1082 ntBASIC3.61□□□□□ -1.83
CDH11P55287 RNA5SP283-201ENST00000365604 119 ntBASIC3.61□□□□□ -1.83
CDH11P55287 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.61□□□□□ -1.83
CDH11P55287 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
CDH11P55287 AC025750.1-201ENST00000399891 379 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AL445189.1-201ENST00000405722 338 ntBASIC3.61□□□□□ -1.83
CDH11P55287 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.61□□□□□ -1.83
CDH11P55287 RN7SKP27-201ENST00000410684 333 ntBASIC3.61□□□□□ -1.83
CDH11P55287 OFD1P18Y-201ENST00000420889 959 ntBASIC3.61□□□□□ -1.83
CDH11P55287 RPL7P2-201ENST00000427639 268 ntBASIC3.61□□□□□ -1.83
CDH11P55287 ZYG11AP1-201ENST00000430329 837 ntBASIC3.61□□□□□ -1.83
CDH11P55287 BMS1P19-201ENST00000433925 393 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AL590103.1-201ENST00000434488 307 ntBASIC3.61□□□□□ -1.83
CDH11P55287 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH11P55287 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH11P55287 MTND4P6-201ENST00000438297 472 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH11P55287 AC122718.1-201ENST00000439448 744 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AC239367.2-201ENST00000447309 705 ntBASIC3.61□□□□□ -1.83
CDH11P55287 RNU7-136P-201ENST00000458819 69 ntBASIC3.61□□□□□ -1.83
CDH11P55287 FAM133DP-201ENST00000464802 691 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH11P55287 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH11P55287 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH11P55287 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH11P55287 TMEM248P1-201ENST00000510579 951 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.61□□□□□ -1.83
CDH11P55287 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH11P55287 SNORA70.14-201ENST00000516205 110 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AC008802.1-201ENST00000519121 791 ntBASIC3.61□□□□□ -1.83
CDH11P55287 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH11P55287 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CDH11P55287 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.61□□□□□ -1.83
CDH11P55287 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH11P55287 MIR4286-201ENST00000580651 93 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AC093227.2-201ENST00000589357 285 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH11P55287 AC083899.3-201ENST00000603413 594 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AL358072.1-201ENST00000604156 575 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AC010680.3-201ENST00000604215 520 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AL163642.2-201ENST00000604722 1019 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AC010680.4-201ENST00000605334 543 ntBASIC3.61□□□□□ -1.83
CDH11P55287 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH11P55287 AC025588.4-201ENST00000615802 908 ntBASIC3.61□□□□□ -1.83
CDH11P55287 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH11P55287 AC231657.1-201ENST00000624313 397 ntBASIC3.61□□□□□ -1.83
CDH11P55287 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH11P55287 AC079228.1-201ENST00000624774 1049 ntBASIC3.61□□□□□ -1.83
CDH11P55287 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CDH11P55287 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH11P55287 EXOC5P1-201ENST00000510543 1969 ntBASIC3.61□□□□□ -1.83
CDH11P55287 ZNF33CP-201ENST00000432492 2030 ntBASIC3.61□□□□□ -1.83
CDH11P55287 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH11P55287 MTCO1P23-201ENST00000415223 1526 ntBASIC3.6□□□□□ -1.83
CDH11P55287 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH11P55287 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH11P55287 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH11P55287 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH11P55287 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH11P55287 RPL21P132-201ENST00000331267 462 ntBASIC3.6□□□□□ -1.83
CDH11P55287 SNORA60-201ENST00000362396 134 ntBASIC3.6□□□□□ -1.83
CDH11P55287 RNU1-18P-201ENST00000363062 164 ntBASIC3.6□□□□□ -1.83
CDH11P55287 Y_RNA.302-201ENST00000364997 102 ntBASIC3.6□□□□□ -1.83
CDH11P55287 HMGN2P8-201ENST00000391458 268 ntBASIC3.6□□□□□ -1.83
CDH11P55287 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.6□□□□□ -1.83
CDH11P55287 RPL23AP39-201ENST00000415533 405 ntBASIC3.6□□□□□ -1.83
CDH11P55287 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH11P55287 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.6□□□□□ -1.83
CDH11P55287 RPL7P30-201ENST00000420888 709 ntBASIC3.6□□□□□ -1.83
CDH11P55287 AL049610.1-201ENST00000423374 372 ntBASIC3.6□□□□□ -1.83
CDH11P55287 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH11P55287 RPL23AP35-201ENST00000451906 501 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 470.8 ms