Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX2P48431 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SOX2P48431 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX2P48431 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SOX2P48431 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SOX2P48431 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SOX2P48431 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
SOX2P48431 AC018529.3-201ENST00000624212 2254 ntBASIC3.95□□□□□ -1.78
SOX2P48431 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX2P48431 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SOX2P48431 AL592437.2-201ENST00000421655 2434 ntBASIC3.94□□□□□ -1.78
SOX2P48431 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX2P48431 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX2P48431 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SOX2P48431 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SOX2P48431 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX2P48431 RNU4-12P-201ENST00000365233 139 ntBASIC3.94□□□□□ -1.78
SOX2P48431 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SOX2P48431 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 MIR1250-201ENST00000408098 113 ntBASIC3.94□□□□□ -1.78
SOX2P48431 AC078974.1-201ENST00000411597 223 ntBASIC3.94□□□□□ -1.78
SOX2P48431 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 AL355433.1-201ENST00000422804 300 ntBASIC3.94□□□□□ -1.78
SOX2P48431 AC233728.2-201ENST00000425348 757 ntBASIC3.94□□□□□ -1.78
SOX2P48431 RWDD4P2-201ENST00000426392 563 ntBASIC3.94□□□□□ -1.78
SOX2P48431 RPS12P10-201ENST00000427031 377 ntBASIC3.94□□□□□ -1.78
SOX2P48431 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 VN1R54P-201ENST00000435210 1049 ntBASIC3.94□□□□□ -1.78
SOX2P48431 AL451074.3-201ENST00000437709 472 ntBASIC3.94□□□□□ -1.78
SOX2P48431 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.94□□□□□ -1.78
SOX2P48431 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.94□□□□□ -1.78
SOX2P48431 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 MTCO3P38-201ENST00000468910 766 ntBASIC3.94□□□□□ -1.78
SOX2P48431 RBM43P1-201ENST00000476891 1081 ntBASIC3.94□□□□□ -1.78
SOX2P48431 AC021382.1-201ENST00000483523 359 ntBASIC3.94□□□□□ -1.78
SOX2P48431 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 AC083829.1-201ENST00000503756 657 ntBASIC3.94□□□□□ -1.78
SOX2P48431 HMGB1P29-201ENST00000505659 499 ntBASIC3.94□□□□□ -1.78
SOX2P48431 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 NPM1P41-201ENST00000512920 831 ntBASIC3.94□□□□□ -1.78
SOX2P48431 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.94□□□□□ -1.78
SOX2P48431 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX2P48431 RN7SKP234-201ENST00000517173 224 ntBASIC3.94□□□□□ -1.78
SOX2P48431 IGKV2D-36-201ENST00000518643 226 ntBASIC3.94□□□□□ -1.78
SOX2P48431 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX2P48431 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 SETP2-201ENST00000553886 926 ntBASIC3.94□□□□□ -1.78
SOX2P48431 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.94□□□□□ -1.78
SOX2P48431 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 AC092325.1-201ENST00000566449 554 ntBASIC3.94□□□□□ -1.78
SOX2P48431 MIR3176-201ENST00000582210 90 ntBASIC3.94□□□□□ -1.78
SOX2P48431 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SOX2P48431 AL355812.1-201ENST00000603215 216 ntBASIC3.94□□□□□ -1.78
SOX2P48431 BX664608.1-201ENST00000610519 487 ntBASIC3.94□□□□□ -1.78
SOX2P48431 MIR6729-201ENST00000618194 65 ntBASIC3.94□□□□□ -1.78
SOX2P48431 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX2P48431 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX2P48431 AP002799.1-201ENST00000623552 423 ntBASIC3.94□□□□□ -1.78
SOX2P48431 U3.53-201ENST00000628922 216 ntBASIC3.94□□□□□ -1.78
SOX2P48431 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX2P48431 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX2P48431 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX2P48431 PABPC1P7-201ENST00000413177 1513 ntBASIC3.94□□□□□ -1.78
SOX2P48431 MTCO1P11-201ENST00000429111 1528 ntBASIC3.94□□□□□ -1.78
SOX2P48431 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX2P48431 ZNF33CP-201ENST00000432492 2030 ntBASIC3.94□□□□□ -1.78
SOX2P48431 AL359893.1-201ENST00000447628 1580 ntBASIC3.93□□□□□ -1.78
SOX2P48431 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.93□□□□□ -1.78
SOX2P48431 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX2P48431 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.93□□□□□ -1.78
SOX2P48431 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SOX2P48431 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX2P48431 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
SOX2P48431 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SOX2P48431 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX2P48431 RNU1-15P-201ENST00000353977 144 ntBASIC3.93□□□□□ -1.78
SOX2P48431 RNU6-1283P-201ENST00000365314 105 ntBASIC3.93□□□□□ -1.78
SOX2P48431 RNU6-359P-201ENST00000365466 108 ntBASIC3.93□□□□□ -1.78
SOX2P48431 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SOX2P48431 RNU6-339P-201ENST00000384310 107 ntBASIC3.93□□□□□ -1.78
SOX2P48431 MT-TC-201ENST00000387405 66 ntBASIC3.93□□□□□ -1.78
SOX2P48431 MIR765-201ENST00000390226 114 ntBASIC3.93□□□□□ -1.78
SOX2P48431 U3.20-201ENST00000390909 217 ntBASIC3.93□□□□□ -1.78
SOX2P48431 U3.29-201ENST00000391296 212 ntBASIC3.93□□□□□ -1.78
SOX2P48431 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.93□□□□□ -1.78
SOX2P48431 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.93□□□□□ -1.78
SOX2P48431 RPS12P5-201ENST00000423449 371 ntBASIC3.93□□□□□ -1.78
SOX2P48431 TIMM9P3-201ENST00000428659 274 ntBASIC3.93□□□□□ -1.78
SOX2P48431 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.93□□□□□ -1.78
SOX2P48431 FCF1P1-201ENST00000432690 571 ntBASIC3.93□□□□□ -1.78
SOX2P48431 NRBF2P3-201ENST00000432731 865 ntBASIC3.93□□□□□ -1.78
SOX2P48431 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.93□□□□□ -1.78
SOX2P48431 UBE2V1P13-201ENST00000436983 439 ntBASIC3.93□□□□□ -1.78
SOX2P48431 RBMX2P4-201ENST00000441256 376 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms