Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HTTP42858 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.47□□□□□ -2.01
HTTP42858 RMST_9.1-201ENST00000619945 193 ntBASIC2.47□□□□□ -2.01
HTTP42858 AL589994.2-201ENST00000621124 579 ntBASIC2.47□□□□□ -2.01
HTTP42858 Z99496.1-201ENST00000469424 1477 ntBASIC2.47□□□□□ -2.01
HTTP42858 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
HTTP42858 AC004925.1-201ENST00000624256 2706 ntBASIC2.47□□□□□ -2.01
HTTP42858 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HTTP42858 MIR583-201ENST00000384846 75 ntBASIC2.47□□□□□ -2.01
HTTP42858 AL513175.2-201ENST00000422071 443 ntBASIC2.47□□□□□ -2.01
HTTP42858 AC005840.1-201ENST00000498412 377 ntBASIC2.47□□□□□ -2.01
HTTP42858 MIR2114-201ENST00000516645 80 ntBASIC2.47□□□□□ -2.01
HTTP42858 AC004520.1-201ENST00000608362 1413 ntBASIC2.47□□□□□ -2.01
HTTP42858 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HTTP42858 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
HTTP42858 AC008432.1-201ENST00000615912 1320 ntBASIC2.47□□□□□ -2.01
HTTP42858 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
HTTP42858 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.46□□□□□ -2.01
HTTP42858 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
HTTP42858 BTF3P4-201ENST00000418852 495 ntBASIC2.46□□□□□ -2.01
HTTP42858 AC011037.1-201ENST00000483964 558 ntBASIC2.46□□□□□ -2.01
HTTP42858 OR4A45P-201ENST00000529954 901 ntBASIC2.46□□□□□ -2.01
HTTP42858 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.46□□□□□ -2.01
HTTP42858 OR4T1P-201ENST00000554933 911 ntBASIC2.46□□□□□ -2.01
HTTP42858 RN7SL622P-201ENST00000585292 275 ntBASIC2.46□□□□□ -2.01
HTTP42858 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.46□□□□□ -2.01
HTTP42858 AC008121.2-201ENST00000614647 523 ntBASIC2.46□□□□□ -2.01
HTTP42858 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.46□□□□□ -2.02
HTTP42858 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.46□□□□□ -2.02
HTTP42858 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
HTTP42858 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.46□□□□□ -2.02
HTTP42858 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.46□□□□□ -2.02
HTTP42858 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HTTP42858 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HTTP42858 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
HTTP42858 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HTTP42858 SNORD114-26-201ENST00000363543 72 ntBASIC2.46□□□□□ -2.02
HTTP42858 RPL12P25-201ENST00000455592 494 ntBASIC2.46□□□□□ -2.02
HTTP42858 RPL21P71-201ENST00000465598 459 ntBASIC2.46□□□□□ -2.02
HTTP42858 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.46□□□□□ -2.02
HTTP42858 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.46□□□□□ -2.02
HTTP42858 RNA5SP200-201ENST00000516360 103 ntBASIC2.46□□□□□ -2.02
HTTP42858 RN7SKP234-201ENST00000517173 224 ntBASIC2.46□□□□□ -2.02
HTTP42858 AMZ2P1-203ENST00000565833 850 ntBASIC2.46□□□□□ -2.02
HTTP42858 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HTTP42858 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.46□□□□□ -2.02
HTTP42858 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HTTP42858 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC2.45□□□□□ -2.02
HTTP42858 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.45□□□□□ -2.02
HTTP42858 FRG1BP-201ENST00000278882 761 ntBASIC2.45□□□□□ -2.02
HTTP42858 SNORA11.4-201ENST00000408823 129 ntBASIC2.45□□□□□ -2.02
HTTP42858 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.45□□□□□ -2.02
HTTP42858 TRMT112P2-201ENST00000512910 132 ntBASIC2.45□□□□□ -2.02
HTTP42858 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.45□□□□□ -2.02
HTTP42858 AL451074.6-201ENST00000608512 729 ntBASIC2.45□□□□□ -2.02
HTTP42858 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.45□□□□□ -2.02
HTTP42858 AC063952.1-203ENST00000634410 658 ntBASIC2.45□□□□□ -2.02
HTTP42858 MIR219B-201ENST00000637023 88 ntBASIC2.45□□□□□ -2.02
HTTP42858 AL031985.3-201ENST00000565390 2449 ntBASIC2.45□□□□□ -2.02
HTTP42858 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
HTTP42858 RN7SKP247-201ENST00000411094 308 ntBASIC2.45□□□□□ -2.02
HTTP42858 ATP5J2P3-201ENST00000451550 258 ntBASIC2.45□□□□□ -2.02
HTTP42858 RNA5SP490-201ENST00000517141 136 ntBASIC2.45□□□□□ -2.02
HTTP42858 AC105137.2-201ENST00000569073 466 ntBASIC2.45□□□□□ -2.02
HTTP42858 AC009831.4-201ENST00000620744 325 ntBASIC2.45□□□□□ -2.02
HTTP42858 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.45□□□□□ -2.02
HTTP42858 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
HTTP42858 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.44□□□□□ -2.02
HTTP42858 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.44□□□□□ -2.02
HTTP42858 AL109809.4-201ENST00000603520 2185 ntBASIC2.44□□□□□ -2.02
HTTP42858 MIR337-201ENST00000362281 93 ntBASIC2.44□□□□□ -2.02
HTTP42858 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.44□□□□□ -2.02
HTTP42858 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.44□□□□□ -2.02
HTTP42858 AC093591.3-201ENST00000634516 308 ntBASIC2.44□□□□□ -2.02
HTTP42858 AC026523.2-201ENST00000625039 7739 ntBASIC2.44□□□□□ -2.02
HTTP42858 RNY1P10-201ENST00000363268 113 ntBASIC2.44□□□□□ -2.02
HTTP42858 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
HTTP42858 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HTTP42858 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HTTP42858 AC002543.1-201ENST00000299783 1954 ntBASIC2.44□□□□□ -2.02
HTTP42858 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HTTP42858 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HTTP42858 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.44□□□□□ -2.02
HTTP42858 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.44□□□□□ -2.02
HTTP42858 AC072039.1-201ENST00000477611 581 ntBASIC2.44□□□□□ -2.02
HTTP42858 AC004263.1-201ENST00000479327 332 ntBASIC2.44□□□□□ -2.02
HTTP42858 RN7SL297P-201ENST00000483161 293 ntBASIC2.44□□□□□ -2.02
HTTP42858 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.44□□□□□ -2.02
HTTP42858 AC091953.2-201ENST00000623979 160 ntBASIC2.44□□□□□ -2.02
HTTP42858 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
HTTP42858 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HTTP42858 AL356489.2-201ENST00000566968 3528 ntBASIC2.43□□□□□ -2.02
HTTP42858 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HTTP42858 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HTTP42858 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HTTP42858 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HTTP42858 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.43□□□□□ -2.02
HTTP42858 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.43□□□□□ -2.02
HTTP42858 AL118520.1-201ENST00000450770 291 ntBASIC2.43□□□□□ -2.02
HTTP42858 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms