Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.88□□□□□ -1.63
GDNFP39905 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.88□□□□□ -1.63
GDNFP39905 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GDNFP39905 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
GDNFP39905 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GDNFP39905 AC104260.2-201ENST00000623551 3497 ntBASIC4.88□□□□□ -1.63
GDNFP39905 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.88□□□□□ -1.63
GDNFP39905 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
GDNFP39905 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.87□□□□□ -1.63
GDNFP39905 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GDNFP39905 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GDNFP39905 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.87□□□□□ -1.63
GDNFP39905 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.87□□□□□ -1.63
GDNFP39905 AC012254.3-201ENST00000591183 2117 ntBASIC4.87□□□□□ -1.63
GDNFP39905 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
GDNFP39905 THAP12P4-201ENST00000528321 2266 ntBASIC4.87□□□□□ -1.63
GDNFP39905 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GDNFP39905 SELENOWP1-201ENST00000322792 252 ntBASIC4.87□□□□□ -1.63
GDNFP39905 RNU6-450P-201ENST00000364654 107 ntBASIC4.87□□□□□ -1.63
GDNFP39905 SNORD115-7-201ENST00000365306 82 ntBASIC4.87□□□□□ -1.63
GDNFP39905 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GDNFP39905 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.87□□□□□ -1.63
GDNFP39905 Y_RNA.404-201ENST00000383978 102 ntBASIC4.87□□□□□ -1.63
GDNFP39905 RNA5SP241-201ENST00000391326 114 ntBASIC4.87□□□□□ -1.63
GDNFP39905 AL391417.1-201ENST00000404100 426 ntBASIC4.87□□□□□ -1.63
GDNFP39905 NDUFS5P1-201ENST00000405668 289 ntBASIC4.87□□□□□ -1.63
GDNFP39905 SNORA11.5-201ENST00000408163 128 ntBASIC4.87□□□□□ -1.63
GDNFP39905 AC114491.1-201ENST00000416095 246 ntBASIC4.87□□□□□ -1.63
GDNFP39905 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.87□□□□□ -1.63
GDNFP39905 ATG3P1-201ENST00000419507 911 ntBASIC4.87□□□□□ -1.63
GDNFP39905 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.87□□□□□ -1.63
GDNFP39905 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.87□□□□□ -1.63
GDNFP39905 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.87□□□□□ -1.63
GDNFP39905 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.87□□□□□ -1.63
GDNFP39905 AC009963.3-201ENST00000458090 486 ntBASIC4.87□□□□□ -1.63
GDNFP39905 AC023194.2-201ENST00000465398 406 ntBASIC4.87□□□□□ -1.63
GDNFP39905 AC011476.1-201ENST00000466725 307 ntBASIC4.87□□□□□ -1.63
GDNFP39905 AC092451.1-201ENST00000480211 153 ntBASIC4.87□□□□□ -1.63
GDNFP39905 AC005912.1-201ENST00000495392 255 ntBASIC4.87□□□□□ -1.63
GDNFP39905 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.87□□□□□ -1.63
GDNFP39905 IGLV3-24-201ENST00000517477 197 ntBASIC4.87□□□□□ -1.63
GDNFP39905 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GDNFP39905 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GDNFP39905 AP000859.1-201ENST00000525536 307 ntBASIC4.87□□□□□ -1.63
GDNFP39905 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.87□□□□□ -1.63
GDNFP39905 AP000827.1-201ENST00000527814 258 ntBASIC4.87□□□□□ -1.63
GDNFP39905 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.87□□□□□ -1.63
GDNFP39905 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.87□□□□□ -1.63
GDNFP39905 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.87□□□□□ -1.63
GDNFP39905 AC026826.3-201ENST00000561747 158 ntBASIC4.87□□□□□ -1.63
GDNFP39905 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.87□□□□□ -1.63
GDNFP39905 AC124068.1-201ENST00000563131 678 ntBASIC4.87□□□□□ -1.63
GDNFP39905 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GDNFP39905 COX6CP3-201ENST00000580869 223 ntBASIC4.87□□□□□ -1.63
GDNFP39905 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.87□□□□□ -1.63
GDNFP39905 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.87□□□□□ -1.63
GDNFP39905 AC009229.3-201ENST00000608056 282 ntBASIC4.87□□□□□ -1.63
GDNFP39905 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.87□□□□□ -1.63
GDNFP39905 AL627230.1-201ENST00000613077 211 ntBASIC4.87□□□□□ -1.63
GDNFP39905 AC025034.2-201ENST00000623264 286 ntBASIC4.87□□□□□ -1.63
GDNFP39905 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.87□□□□□ -1.63
GDNFP39905 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.87□□□□□ -1.63
GDNFP39905 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.87□□□□□ -1.63
GDNFP39905 AC005592.1-201ENST00000566527 1640 ntBASIC4.86□□□□□ -1.63
GDNFP39905 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GDNFP39905 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.86□□□□□ -1.63
GDNFP39905 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.86□□□□□ -1.63
GDNFP39905 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.86□□□□□ -1.63
GDNFP39905 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.86□□□□□ -1.63
GDNFP39905 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GDNFP39905 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GDNFP39905 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GDNFP39905 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
GDNFP39905 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
GDNFP39905 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.86□□□□□ -1.63
GDNFP39905 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GDNFP39905 RNU1-35P-201ENST00000362782 153 ntBASIC4.86□□□□□ -1.63
GDNFP39905 SNORD3E-201ENST00000362899 217 ntBASIC4.86□□□□□ -1.63
GDNFP39905 RNU1-146P-201ENST00000364015 165 ntBASIC4.86□□□□□ -1.63
GDNFP39905 RNU6-593P-201ENST00000364716 112 ntBASIC4.86□□□□□ -1.63
GDNFP39905 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GDNFP39905 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GDNFP39905 Y_RNA.447-201ENST00000384184 113 ntBASIC4.86□□□□□ -1.63
GDNFP39905 RNU6-729P-201ENST00000384399 107 ntBASIC4.86□□□□□ -1.63
GDNFP39905 MIR621-201ENST00000384919 96 ntBASIC4.86□□□□□ -1.63
GDNFP39905 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
GDNFP39905 RNU6-278P-201ENST00000390945 109 ntBASIC4.86□□□□□ -1.63
GDNFP39905 AL031985.1-201ENST00000392713 418 ntBASIC4.86□□□□□ -1.63
GDNFP39905 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.86□□□□□ -1.63
GDNFP39905 AL359643.1-201ENST00000404109 423 ntBASIC4.86□□□□□ -1.63
GDNFP39905 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.86□□□□□ -1.63
GDNFP39905 RN7SKP106-201ENST00000410832 272 ntBASIC4.86□□□□□ -1.63
GDNFP39905 Z93019.1-201ENST00000416450 973 ntBASIC4.86□□□□□ -1.63
GDNFP39905 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.86□□□□□ -1.63
GDNFP39905 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.86□□□□□ -1.63
GDNFP39905 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.86□□□□□ -1.63
GDNFP39905 AC005077.1-201ENST00000449226 375 ntBASIC4.86□□□□□ -1.63
GDNFP39905 PPIAP27-201ENST00000453800 265 ntBASIC4.86□□□□□ -1.63
GDNFP39905 AC068228.1-201ENST00000461723 211 ntBASIC4.86□□□□□ -1.63
GDNFP39905 RN7SL170P-201ENST00000487098 295 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms