Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL590103.1-201ENST00000434488 307 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC13P31276 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HOXC13P31276 MTND1P34-201ENST00000438556 671 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 RANP8-201ENST00000444720 713 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC13P31276 COX6CP18-201ENST00000448769 222 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 RSL24D1P3-201ENST00000449255 495 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 AL133477.1-201ENST00000457472 514 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 AC069528.1-202ENST00000482888 637 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC13P31276 MTCYBP35-201ENST00000503630 1137 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC13P31276 AC093752.1-206ENST00000511823 336 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 SNORA19.3-201ENST00000516165 130 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 SNORA70.24-201ENST00000517233 118 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
HOXC13P31276 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC13P31276 AP000889.1-201ENST00000530968 660 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC13P31276 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC13P31276 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC13P31276 AC006254.3-201ENST00000603353 884 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 AP003392.5-201ENST00000607857 415 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 AL121652.1-201ENST00000608851 448 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 AL390240.1-201ENST00000612950 384 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 AC018755.4-201ENST00000619715 454 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC13P31276 BDP1P-201ENST00000582658 1990 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC13P31276 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC13P31276 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC13P31276 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
HOXC13P31276 AC130650.2-201ENST00000618736 2403 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC13P31276 MTND4P4-201ENST00000439033 1366 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4□□□□□ -1.77
HOXC13P31276 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
HOXC13P31276 Z99496.1-201ENST00000469424 1477 ntBASIC4□□□□□ -1.77
HOXC13P31276 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HOXC13P31276 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HOXC13P31276 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC13P31276 AC244517.1-201ENST00000606030 2086 ntBASIC4□□□□□ -1.77
HOXC13P31276 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4□□□□□ -1.77
HOXC13P31276 TAS2R15P-201ENST00000390674 928 ntBASIC4□□□□□ -1.77
HOXC13P31276 AC007066.1-201ENST00000392902 381 ntBASIC4□□□□□ -1.77
HOXC13P31276 RPL7P60-201ENST00000397636 735 ntBASIC4□□□□□ -1.77
HOXC13P31276 SNORA3.3-201ENST00000408712 125 ntBASIC4□□□□□ -1.77
HOXC13P31276 MTCO2P8-201ENST00000412213 658 ntBASIC4□□□□□ -1.77
HOXC13P31276 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4□□□□□ -1.77
HOXC13P31276 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4□□□□□ -1.77
HOXC13P31276 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC13P31276 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4□□□□□ -1.77
HOXC13P31276 TRAPPC2P4-201ENST00000421750 331 ntBASIC4□□□□□ -1.77
HOXC13P31276 MTCO3P1-205ENST00000422088 832 ntBASIC4□□□□□ -1.77
HOXC13P31276 AL050321.1-201ENST00000432363 400 ntBASIC4□□□□□ -1.77
HOXC13P31276 NEK4P1-201ENST00000433383 879 ntBASIC4□□□□□ -1.77
HOXC13P31276 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4□□□□□ -1.77
HOXC13P31276 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4□□□□□ -1.77
HOXC13P31276 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4□□□□□ -1.77
HOXC13P31276 Z74696.2-201ENST00000436514 498 ntBASIC4□□□□□ -1.77
HOXC13P31276 ATP5C1P1-201ENST00000441945 895 ntBASIC4□□□□□ -1.77
HOXC13P31276 AC104978.1-201ENST00000449387 391 ntBASIC4□□□□□ -1.77
HOXC13P31276 HMGB3P22-202ENST00000451823 572 ntBASIC4□□□□□ -1.77
HOXC13P31276 DUXAP8-207ENST00000456786 622 ntBASIC4□□□□□ -1.77
HOXC13P31276 RPS4XP10-201ENST00000465034 731 ntBASIC4□□□□□ -1.77
HOXC13P31276 RPS27AP1-201ENST00000475545 471 ntBASIC4□□□□□ -1.77
HOXC13P31276 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4□□□□□ -1.77
HOXC13P31276 AC074250.1-201ENST00000511117 192 ntBASIC4□□□□□ -1.77
HOXC13P31276 DUXAP2-201ENST00000519198 589 ntBASIC4□□□□□ -1.77
HOXC13P31276 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4□□□□□ -1.77
HOXC13P31276 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4□□□□□ -1.77
HOXC13P31276 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC13P31276 AP003033.1-201ENST00000527244 415 ntBASIC4□□□□□ -1.77
HOXC13P31276 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4□□□□□ -1.77
HOXC13P31276 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4□□□□□ -1.77
HOXC13P31276 NACA-211ENST00000548563 827 ntTSL 5 BASIC4□□□□□ -1.77
HOXC13P31276 MRPS36P5-201ENST00000551909 298 ntBASIC4□□□□□ -1.77
HOXC13P31276 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4□□□□□ -1.77
HOXC13P31276 MIR5047-201ENST00000579212 100 ntBASIC4□□□□□ -1.77
HOXC13P31276 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4□□□□□ -1.77
HOXC13P31276 AC068790.2-201ENST00000602601 557 ntBASIC4□□□□□ -1.77
HOXC13P31276 Z94722.1-201ENST00000604328 474 ntBASIC4□□□□□ -1.77
HOXC13P31276 AC092954.1-201ENST00000609121 445 ntBASIC4□□□□□ -1.77
HOXC13P31276 DUXAP10-204ENST00000612052 616 ntBASIC4□□□□□ -1.77
HOXC13P31276 AL591424.2-201ENST00000617023 128 ntBASIC4□□□□□ -1.77
HOXC13P31276 5S_rRNA.12-201ENST00000617631 107 ntBASIC4□□□□□ -1.77
HOXC13P31276 AC015967.1-201ENST00000619893 476 ntBASIC4□□□□□ -1.77
HOXC13P31276 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4□□□□□ -1.77
HOXC13P31276 AL078595.3-201ENST00000623815 1166 ntBASIC4□□□□□ -1.77
HOXC13P31276 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4□□□□□ -1.77
HOXC13P31276 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HOXC13P31276 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC13P31276 DDX43P2-201ENST00000604753 1354 ntBASIC4□□□□□ -1.77
HOXC13P31276 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXC13P31276 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC13P31276 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC13P31276 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HOXC13P31276 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HOXC13P31276 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms