Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RPL21P89-201ENST00000444021 467 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 AC007967.1-201ENST00000455422 1159 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.87□□□□□ -1.47
ERCC3P19447 RNU6-420P-201ENST00000458780 107 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 AC063943.1-201ENST00000465434 453 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 AC135721.1-201ENST00000497954 479 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.87□□□□□ -1.47
ERCC3P19447 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.87□□□□□ -1.47
ERCC3P19447 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.87□□□□□ -1.47
ERCC3P19447 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.87□□□□□ -1.47
ERCC3P19447 AC104383.1-201ENST00000530297 370 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 RN7SL290P-201ENST00000578661 300 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 AC005730.3-201ENST00000583067 366 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 AC008752.3-201ENST00000588113 712 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.87□□□□□ -1.47
ERCC3P19447 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.87□□□□□ -1.47
ERCC3P19447 AC012669.1-201ENST00000603209 283 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 AP001330.5-201ENST00000607176 411 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC3P19447 AL020991.1-201ENST00000612314 373 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.87□□□□□ -1.47
ERCC3P19447 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC3P19447 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.87□□□□□ -1.47
ERCC3P19447 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.87□□□□□ -1.47
ERCC3P19447 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.87□□□□□ -1.47
ERCC3P19447 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.87□□□□□ -1.47
ERCC3P19447 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.87□□□□□ -1.47
ERCC3P19447 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC3P19447 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC3P19447 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.86□□□□□ -1.47
ERCC3P19447 Z73965.1-201ENST00000623412 2297 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC3P19447 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.86□□□□□ -1.47
ERCC3P19447 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC3P19447 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC3P19447 MIR589-201ENST00000385238 99 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC3P19447 AL591416.1-201ENST00000404015 867 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 RNU6-712P-201ENST00000410558 100 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 ZNF90P2-204ENST00000419323 1075 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.86□□□□□ -1.47
ERCC3P19447 RPL34P6-201ENST00000432390 345 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AL606489.2-201ENST00000433886 234 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.86□□□□□ -1.47
ERCC3P19447 RN7SL459P-201ENST00000481078 302 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AC022133.1-201ENST00000490961 571 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AC097173.1-201ENST00000505862 819 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AC098799.2-201ENST00000509466 868 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AC022360.1-201ENST00000521058 340 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.86□□□□□ -1.47
ERCC3P19447 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.86□□□□□ -1.47
ERCC3P19447 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.86□□□□□ -1.47
ERCC3P19447 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.86□□□□□ -1.47
ERCC3P19447 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.86□□□□□ -1.47
ERCC3P19447 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.86□□□□□ -1.47
ERCC3P19447 AC055876.1-202ENST00000567053 138 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 GLUD1P4-201ENST00000590914 418 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AC234771.5-201ENST00000600161 514 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AC006254.3-201ENST00000603353 884 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AC008745.1-201ENST00000604064 271 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AC011626.1-201ENST00000604710 562 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AP005432.2-201ENST00000608162 586 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 MIR378J-201ENST00000611988 109 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
ERCC3P19447 MIR7703-201ENST00000620784 77 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AC244100.1-202ENST00000621554 382 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 AL161637.1-201ENST00000622380 412 ntBASIC5.86□□□□□ -1.47
ERCC3P19447 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC3P19447 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC3P19447 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC3P19447 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC3P19447 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC3P19447 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
ERCC3P19447 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.86□□□□□ -1.47
ERCC3P19447 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC3P19447 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
ERCC3P19447 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ERCC3P19447 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ERCC3P19447 ZNF680P1-201ENST00000436625 1469 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ERCC3P19447 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
ERCC3P19447 AC000123.3-201ENST00000624029 4975 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
ERCC3P19447 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ERCC3P19447 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ERCC3P19447 SNORA72.1-201ENST00000363485 129 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 U3.11-201ENST00000364476 212 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 RN7SKP153-201ENST00000365026 316 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 RNU1-39P-201ENST00000383897 165 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 RNU6-39P-201ENST00000384344 107 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 Z97832.1-201ENST00000402490 328 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.85□□□□□ -1.47
ERCC3P19447 UBE2FP1-201ENST00000416536 447 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.85□□□□□ -1.47
ERCC3P19447 AC016712.1-201ENST00000431088 378 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ERCC3P19447 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.85□□□□□ -1.47
ERCC3P19447 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.85□□□□□ -1.47
ERCC3P19447 AC006480.1-201ENST00000449887 378 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 AL162388.1-201ENST00000450912 352 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms