Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SNORD56.2-201ENST00000363242 71 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 RNU6-1322P-201ENST00000364309 107 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 SSXP10-201ENST00000402595 565 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 SNRPEP10-201ENST00000420249 274 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 AC019097.1-201ENST00000424783 735 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.98□□□□□ -1.61
PTPN1P18031 RPL7P54-201ENST00000438336 674 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN1P18031 USP9YP15-201ENST00000442391 422 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.98□□□□□ -1.61
PTPN1P18031 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN1P18031 UBDP1-202ENST00000457888 382 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 RNU6-420P-201ENST00000458780 107 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 snoU13.7-201ENST00000459220 104 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.98□□□□□ -1.61
PTPN1P18031 AP000942.1-201ENST00000463969 747 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 PLGLA-201ENST00000465668 449 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.98□□□□□ -1.61
PTPN1P18031 RPS4XP18-201ENST00000495480 763 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 OR5H5P-201ENST00000503164 928 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 AC093767.1-201ENST00000504523 156 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 HMGB3P16-201ENST00000508037 287 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.98□□□□□ -1.61
PTPN1P18031 RNA5SP464-201ENST00000516251 108 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.98□□□□□ -1.61
PTPN1P18031 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN1P18031 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.98□□□□□ -1.61
PTPN1P18031 GLYCAM1-201ENST00000546596 285 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN1P18031 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN1P18031 AC105129.1-201ENST00000560250 297 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.98□□□□□ -1.61
PTPN1P18031 MIR3118-1-201ENST00000581787 76 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 AC116447.1-201ENST00000613153 453 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 MIR6864-201ENST00000617935 70 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 AC022106.2-201ENST00000620114 757 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN1P18031 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PTPN1P18031 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN1P18031 AC107068.1-201ENST00000563286 4218 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN1P18031 AP000542.2-201ENST00000623199 6179 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PTPN1P18031 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.98□□□□□ -1.61
PTPN1P18031 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PTPN1P18031 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN1P18031 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN1P18031 AL592148.3-201ENST00000608771 2646 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN1P18031 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PTPN1P18031 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN1P18031 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN1P18031 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN1P18031 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PTPN1P18031 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.97□□□□□ -1.61
PTPN1P18031 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN1P18031 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN1P18031 RNU4-44P-201ENST00000363050 141 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 RNU6-1243P-201ENST00000364028 107 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN1P18031 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN1P18031 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN1P18031 RNU1-39P-201ENST00000383897 165 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 SNORA70F-201ENST00000384142 135 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 AP000580.1-201ENST00000404439 358 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN1P18031 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN1P18031 AC119751.6-201ENST00000416712 186 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 RPL36AP10-201ENST00000421785 322 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 AL590233.1-201ENST00000430017 456 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN1P18031 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN1P18031 SDCBPP1-201ENST00000440192 890 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.97□□□□□ -1.61
PTPN1P18031 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN1P18031 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN1P18031 RN7SL738P-201ENST00000470264 297 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 RPL36AP51-201ENST00000487216 318 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN1P18031 AC010587.1-201ENST00000505809 469 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN1P18031 MTND3P22-201ENST00000510932 243 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 NPM1P41-201ENST00000512920 831 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 AC093677.1-201ENST00000514414 678 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN1P18031 CENPUP1-201ENST00000526649 1202 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 OR5AN2P-201ENST00000534535 896 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN1P18031 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN1P18031 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN1P18031 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN1P18031 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN1P18031 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN1P18031 MIR4330-201ENST00000579077 105 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 AL035413.2-201ENST00000604801 525 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 AC009318.4-201ENST00000620496 486 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 AC091953.2-201ENST00000623979 160 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 AL359697.1-201ENST00000624879 587 ntBASIC4.97□□□□□ -1.61
PTPN1P18031 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.97□□□□□ -1.61
PTPN1P18031 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms