Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC234775.3-201ENST00000564612 656 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 AL161912.3-201ENST00000605404 628 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.75□□□□□ -1.97
COL11A1P12107 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL11A1P12107 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL11A1P12107 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.74□□□□□ -1.97
COL11A1P12107 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
COL11A1P12107 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.74□□□□□ -1.97
COL11A1P12107 SDCBPP3-201ENST00000419629 891 ntBASIC2.74□□□□□ -1.97
COL11A1P12107 AL121578.1-201ENST00000428051 892 ntBASIC2.74□□□□□ -1.97
COL11A1P12107 AL603825.1-201ENST00000438481 80 ntBASIC2.74□□□□□ -1.97
COL11A1P12107 AC133134.1-201ENST00000466800 359 ntBASIC2.74□□□□□ -1.97
COL11A1P12107 HAUS1P1-201ENST00000505275 832 ntBASIC2.74□□□□□ -1.97
COL11A1P12107 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.74□□□□□ -1.97
COL11A1P12107 RNU6-991P-201ENST00000516168 107 ntBASIC2.74□□□□□ -1.97
COL11A1P12107 AP001207.1-201ENST00000524051 481 ntBASIC2.74□□□□□ -1.97
COL11A1P12107 YWHAZP1-201ENST00000556286 722 ntBASIC2.74□□□□□ -1.97
COL11A1P12107 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.74□□□□□ -1.97
COL11A1P12107 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.74□□□□□ -1.97
COL11A1P12107 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.74□□□□□ -1.97
COL11A1P12107 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.74□□□□□ -1.97
COL11A1P12107 AC010200.2-201ENST00000605098 235 ntBASIC2.74□□□□□ -1.97
COL11A1P12107 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.74□□□□□ -1.97
COL11A1P12107 U4.3-201ENST00000621047 82 ntBASIC2.74□□□□□ -1.97
COL11A1P12107 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.74□□□□□ -1.97
COL11A1P12107 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL11A1P12107 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.73□□□□□ -1.97
COL11A1P12107 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.73□□□□□ -1.97
COL11A1P12107 XIAPP3-201ENST00000312918 795 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 RNA5SP239-201ENST00000410218 129 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 RN7SKP123-201ENST00000410732 291 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 RNU6-603P-201ENST00000411403 107 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.73□□□□□ -1.97
COL11A1P12107 AL158825.1-201ENST00000414735 521 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.73□□□□□ -1.97
COL11A1P12107 RPS12P2-201ENST00000439728 269 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 CLIC4P1-201ENST00000453177 535 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.73□□□□□ -1.97
COL11A1P12107 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.73□□□□□ -1.97
COL11A1P12107 SNORA70.14-201ENST00000516205 110 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 CBX3P5-201ENST00000552017 521 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.73□□□□□ -1.97
COL11A1P12107 MTCO3P13-201ENST00000577757 781 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 AL133370.2-201ENST00000619934 439 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 Z99129.2-201ENST00000619967 314 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 AC110994.2-201ENST00000635481 492 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.73□□□□□ -1.97
COL11A1P12107 AL592437.2-201ENST00000421655 2434 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 AC002543.1-201ENST00000299783 1954 ntBASIC2.73□□□□□ -1.97
COL11A1P12107 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
COL11A1P12107 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
COL11A1P12107 SNORA41-201ENST00000384675 132 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 AC093084.1-201ENST00000424233 687 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 BTG3P1-201ENST00000435859 716 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 CACYBPP1-201ENST00000438592 684 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 HMGB3P12-201ENST00000438745 556 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.72□□□□□ -1.97
COL11A1P12107 LINC00888-204ENST00000487386 421 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.72□□□□□ -1.97
COL11A1P12107 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.72□□□□□ -1.97
COL11A1P12107 OR4A45P-201ENST00000529954 901 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 AP001317.1-201ENST00000531194 960 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 OR8X1P-201ENST00000534542 869 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 AC025260.1-201ENST00000548858 430 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 MIR1273D-201ENST00000577266 86 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.72□□□□□ -1.97
COL11A1P12107 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.72□□□□□ -1.97
COL11A1P12107 AC046143.2-201ENST00000609789 160 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.72□□□□□ -1.97
COL11A1P12107 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.72□□□□□ -1.97
COL11A1P12107 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
COL11A1P12107 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.72□□□□□ -1.97
COL11A1P12107 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL11A1P12107 SNORA25.6-201ENST00000364121 118 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL11A1P12107 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 AC098592.2-201ENST00000413158 265 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 RPS24P8-201ENST00000431490 402 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.72□□□□□ -1.97
COL11A1P12107 AL353597.2-202ENST00000434901 373 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 AC018634.1-201ENST00000437554 401 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.72□□□□□ -1.97
COL11A1P12107 AC022431.1-201ENST00000450941 438 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.72□□□□□ -1.97
COL11A1P12107 AC108210.2-201ENST00000503681 201 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 AC108471.1-201ENST00000513977 287 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.72□□□□□ -1.97
COL11A1P12107 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.72□□□□□ -1.97
COL11A1P12107 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.72□□□□□ -1.97
COL11A1P12107 AC004696.1-201ENST00000614345 607 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 AC009950.2-201ENST00000636548 183 ntBASIC2.72□□□□□ -1.97
COL11A1P12107 CUL1P1-201ENST00000509510 2425 ntBASIC2.71□□□□□ -1.97
COL11A1P12107 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.71□□□□□ -1.98
COL11A1P12107 Z99496.1-201ENST00000469424 1477 ntBASIC2.71□□□□□ -1.98
COL11A1P12107 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL11A1P12107 RNU6-225P-201ENST00000384613 103 ntBASIC2.71□□□□□ -1.98
COL11A1P12107 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL11A1P12107 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
COL11A1P12107 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms