Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 MIR9-1-201ENST00000385198 89 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 RPL31P2-201ENST00000413849 377 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 RPL23AP74-201ENST00000437246 471 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 CACYBPP2-201ENST00000453625 678 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 HMGN2P16-201ENST00000456802 261 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 snoU13.7-201ENST00000459220 104 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 RPL9P33-201ENST00000484311 566 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AC034159.1-201ENST00000513885 583 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AC008494.2-201ENST00000514544 370 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 HIGD1AP3-201ENST00000515857 278 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AC008676.3-201ENST00000521237 435 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AC008562.1-201ENST00000521763 330 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AC100870.1-201ENST00000522035 505 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 POLR2KP1-201ENST00000553226 168 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AC090616.5-202ENST00000582111 297 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 ELOCP29-201ENST00000588193 334 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 VN1R92P-201ENST00000598511 928 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AL133393.1-201ENST00000603277 287 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AC073348.1-201ENST00000623002 331 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 MIR6733-201ENST00000635723 61 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 LRRC77P-213ENST00000637727 880 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DQB2P05538 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
HLA-DQB2P05538 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
HLA-DQB2P05538 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DQB2P05538 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HLA-DQB2P05538 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DQB2P05538 MIR7-1-201ENST00000384871 110 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DQB2P05538 HMGB1P12-201ENST00000438594 598 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 RPL36AP33-201ENST00000450395 310 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 RPS15AP1-201ENST00000457423 391 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DQB2P05538 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DQB2P05538 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DQB2P05538 AP003102.1-201ENST00000525638 661 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 OR4A45P-201ENST00000529954 901 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DQB2P05538 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DQB2P05538 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DQB2P05538 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DQB2P05538 MTCO3P24-201ENST00000572729 782 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 MAGOH2P-202ENST00000584384 429 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 SNRPGP15-201ENST00000600149 222 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 MTCO3P22-201ENST00000603219 784 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 AL137843.1-201ENST00000605078 385 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 AC110792.4-201ENST00000609843 298 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 AL359535.1-201ENST00000612100 1087 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 MIR7106-201ENST00000612419 65 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 AC119674.1-220ENST00000641502 1048 ntBASIC2.69□□□□□ -1.98
HLA-DQB2P05538 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 RNU2-52P-201ENST00000410680 190 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 OR51AB1P-201ENST00000429046 620 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 MUPP-201ENST00000438111 566 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 AL831737.1-201ENST00000441288 271 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 RPS27P5-201ENST00000444247 244 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 Z77249.1-201ENST00000444622 1175 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 HMGB1P48-201ENST00000446155 598 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 SNORD109B-201ENST00000458961 67 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 SNORD109A-201ENST00000459128 67 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 VN1R17P-201ENST00000472048 1090 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 RPL23AP55-201ENST00000498163 452 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 AC111193.1-201ENST00000504097 155 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 COX6B1P6-201ENST00000522347 255 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 AC007536.1-201ENST00000533382 349 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 AC023043.3-201ENST00000593113 385 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms