Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.1□□□□□ -1.91
P04436 RPS3AP12-201ENST00000443616 753 ntBASIC3.1□□□□□ -1.91
P04436 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.1□□□□□ -1.91
P04436 COX6CP18-201ENST00000448769 222 ntBASIC3.1□□□□□ -1.91
P04436 NDUFA5P7-201ENST00000452914 242 ntBASIC3.1□□□□□ -1.91
P04436 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.1□□□□□ -1.91
P04436 AC008155.2-201ENST00000464337 397 ntBASIC3.1□□□□□ -1.91
P04436 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.1□□□□□ -1.91
P04436 PABPC1P3-201ENST00000469174 459 ntBASIC3.1□□□□□ -1.91
P04436 RN7SL807P-201ENST00000470923 297 ntBASIC3.1□□□□□ -1.91
P04436 AC112198.1-201ENST00000505369 1220 ntBASIC3.1□□□□□ -1.91
P04436 SUMO2P5-201ENST00000506790 245 ntBASIC3.1□□□□□ -1.91
P04436 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.1□□□□□ -1.91
P04436 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.1□□□□□ -1.91
P04436 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.1□□□□□ -1.91
P04436 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.1□□□□□ -1.91
P04436 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.1□□□□□ -1.91
P04436 AP006245.1-201ENST00000522549 120 ntBASIC3.1□□□□□ -1.91
P04436 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.1□□□□□ -1.91
P04436 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.1□□□□□ -1.91
P04436 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.1□□□□□ -1.91
P04436 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.1□□□□□ -1.91
P04436 AC091515.1-201ENST00000548110 679 ntBASIC3.1□□□□□ -1.91
P04436 AC087897.1-201ENST00000550134 156 ntBASIC3.1□□□□□ -1.91
P04436 AC122134.1-202ENST00000569111 1201 ntBASIC3.1□□□□□ -1.91
P04436 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.1□□□□□ -1.91
P04436 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.1□□□□□ -1.91
P04436 AC006116.7-201ENST00000590141 756 ntBASIC3.1□□□□□ -1.91
P04436 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.1□□□□□ -1.91
P04436 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.1□□□□□ -1.91
P04436 AL031985.2-201ENST00000600955 480 ntBASIC3.1□□□□□ -1.91
P04436 AL136370.1-201ENST00000608166 691 ntBASIC3.1□□□□□ -1.91
P04436 AP000238.1-201ENST00000608759 426 ntBASIC3.1□□□□□ -1.91
P04436 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
P04436 AC092650.2-201ENST00000619984 902 ntBASIC3.1□□□□□ -1.91
P04436 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.1□□□□□ -1.91
P04436 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.1□□□□□ -1.91
P04436 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
P04436 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.1□□□□□ -1.91
P04436 AC073346.2-201ENST00000624724 2058 ntBASIC3.1□□□□□ -1.91
P04436 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
P04436 AL136164.4-201ENST00000625013 2135 ntBASIC3.1□□□□□ -1.91
P04436 AL513302.2-201ENST00000562313 1842 ntBASIC3.09□□□□□ -1.91
P04436 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
P04436 AC244517.1-201ENST00000606030 2086 ntBASIC3.09□□□□□ -1.91
P04436 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
P04436 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
P04436 RNU6-582P-201ENST00000362989 107 ntBASIC3.09□□□□□ -1.91
P04436 RNU6-1249P-201ENST00000363237 111 ntBASIC3.09□□□□□ -1.91
P04436 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.09□□□□□ -1.91
P04436 MIR217-201ENST00000384817 110 ntBASIC3.09□□□□□ -1.91
P04436 AL136116.1-201ENST00000403591 381 ntBASIC3.09□□□□□ -1.91
P04436 RPL23AP47-201ENST00000408017 460 ntBASIC3.09□□□□□ -1.91
P04436 RNA5SP129-201ENST00000410276 118 ntBASIC3.09□□□□□ -1.91
P04436 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.09□□□□□ -1.91
P04436 AC126124.2-201ENST00000413542 321 ntBASIC3.09□□□□□ -1.91
P04436 AIMP1P1-201ENST00000418670 937 ntBASIC3.09□□□□□ -1.91
P04436 MTCYBP32-201ENST00000427945 1084 ntBASIC3.09□□□□□ -1.91
P04436 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.09□□□□□ -1.91
P04436 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.09□□□□□ -1.91
P04436 AL158071.1-201ENST00000430315 461 ntBASIC3.09□□□□□ -1.91
P04436 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.09□□□□□ -1.91
P04436 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.09□□□□□ -1.91
P04436 AC127537.2-201ENST00000439258 465 ntBASIC3.09□□□□□ -1.91
P04436 PTGES3P1-201ENST00000439531 483 ntBASIC3.09□□□□□ -1.91
P04436 AC008264.1-201ENST00000447612 367 ntBASIC3.09□□□□□ -1.91
P04436 HMGB1P15-201ENST00000453854 435 ntBASIC3.09□□□□□ -1.91
P04436 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.09□□□□□ -1.91
P04436 RPS4XP10-201ENST00000465034 731 ntBASIC3.09□□□□□ -1.91
P04436 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.09□□□□□ -1.91
P04436 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.09□□□□□ -1.91
P04436 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.09□□□□□ -1.91
P04436 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.09□□□□□ -1.91
P04436 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.09□□□□□ -1.91
P04436 RNU6-885P-201ENST00000516607 104 ntBASIC3.09□□□□□ -1.91
P04436 RNA5SP468-201ENST00000516782 93 ntBASIC3.09□□□□□ -1.91
P04436 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.09□□□□□ -1.91
P04436 AC107934.2-201ENST00000518653 310 ntBASIC3.09□□□□□ -1.91
P04436 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.09□□□□□ -1.91
P04436 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.09□□□□□ -1.91
P04436 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.09□□□□□ -1.91
P04436 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.09□□□□□ -1.91
P04436 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.09□□□□□ -1.91
P04436 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.09□□□□□ -1.91
P04436 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
P04436 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.09□□□□□ -1.91
P04436 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.09□□□□□ -1.91
P04436 AC015917.1-201ENST00000579654 510 ntBASIC3.09□□□□□ -1.91
P04436 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
P04436 GAS5-AS1-201ENST00000602767 694 ntBASIC3.09□□□□□ -1.91
P04436 AC128687.1-201ENST00000605304 619 ntBASIC3.09□□□□□ -1.91
P04436 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.09□□□□□ -1.91
P04436 VN1R74P-201ENST00000613259 503 ntBASIC3.09□□□□□ -1.91
P04436 AL109620.1-201ENST00000618738 1197 ntBASIC3.09□□□□□ -1.91
P04436 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.09□□□□□ -1.91
P04436 AL049777.1-201ENST00000622740 518 ntBASIC3.09□□□□□ -1.91
P04436 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.09□□□□□ -1.91
P04436 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
P04436 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.09□□□□□ -1.91
P04436 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms