Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SPTA1P02549 CUL1P1-201ENST00000509510 2425 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SPTA1P02549 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SPTA1P02549 RNA5SP383-201ENST00000362934 120 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 AL359511.1-201ENST00000402970 211 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 AL138878.1-201ENST00000405131 347 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 RPL23AP48-201ENST00000406913 488 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC2.2□□□□□ -2.06
SPTA1P02549 EXTL2P1-201ENST00000446218 416 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.2□□□□□ -2.06
SPTA1P02549 AC068587.2-201ENST00000478386 781 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 AC103975.1-201ENST00000482506 483 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.2□□□□□ -2.06
SPTA1P02549 RN7SKP60-201ENST00000516985 239 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 IGKV2D-23-201ENST00000518179 286 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 AL355493.4-201ENST00000618530 292 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 OR1S1-201ENST00000624470 978 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.2□□□□□ -2.06
SPTA1P02549 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SPTA1P02549 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.2□□□□□ -2.06
SPTA1P02549 ELOCP13-201ENST00000443934 329 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 AC106872.3-201ENST00000495104 446 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.2□□□□□ -2.06
SPTA1P02549 AL391813.2-201ENST00000609113 322 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.2□□□□□ -2.06
SPTA1P02549 AL589994.2-201ENST00000621124 579 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 FAM35BP-202ENST00000497389 3337 ntBASIC2.2□□□□□ -2.06
SPTA1P02549 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SPTA1P02549 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
SPTA1P02549 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.19□□□□□ -2.06
SPTA1P02549 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SPTA1P02549 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.19□□□□□ -2.06
SPTA1P02549 MIR137-201ENST00000385223 102 ntBASIC2.19□□□□□ -2.06
SPTA1P02549 RN7SKP285-201ENST00000410137 318 ntBASIC2.19□□□□□ -2.06
SPTA1P02549 AC080125.1-201ENST00000414888 684 ntBASIC2.19□□□□□ -2.06
SPTA1P02549 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.19□□□□□ -2.06
SPTA1P02549 Z98742.2-201ENST00000431564 187 ntBASIC2.19□□□□□ -2.06
SPTA1P02549 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.19□□□□□ -2.06
SPTA1P02549 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.19□□□□□ -2.06
SPTA1P02549 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.19□□□□□ -2.06
SPTA1P02549 AL355836.1-201ENST00000555951 870 ntBASIC2.19□□□□□ -2.06
SPTA1P02549 MIR5092-201ENST00000583139 88 ntBASIC2.19□□□□□ -2.06
SPTA1P02549 AC005296.1-201ENST00000616145 209 ntBASIC2.19□□□□□ -2.06
SPTA1P02549 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SPTA1P02549 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
SPTA1P02549 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SPTA1P02549 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SPTA1P02549 RNY1P14-201ENST00000384426 108 ntBASIC2.19□□□□□ -2.06
SPTA1P02549 RN7SKP247-201ENST00000411094 308 ntBASIC2.19□□□□□ -2.06
SPTA1P02549 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC2.19□□□□□ -2.06
SPTA1P02549 AC010881.1-201ENST00000433830 235 ntBASIC2.19□□□□□ -2.06
SPTA1P02549 RN7SL75P-201ENST00000461926 281 ntBASIC2.19□□□□□ -2.06
SPTA1P02549 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC2.19□□□□□ -2.06
SPTA1P02549 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.19□□□□□ -2.06
SPTA1P02549 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.19□□□□□ -2.06
SPTA1P02549 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SPTA1P02549 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.19□□□□□ -2.06
SPTA1P02549 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.19□□□□□ -2.06
SPTA1P02549 AC110741.2-201ENST00000605278 268 ntBASIC2.19□□□□□ -2.06
SPTA1P02549 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC2.19□□□□□ -2.06
SPTA1P02549 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SPTA1P02549 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SPTA1P02549 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPTA1P02549 RPL9P7-201ENST00000330965 580 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 AL024474.1-201ENST00000404655 591 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 Z98941.1-201ENST00000407764 100 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 AL451074.5-201ENST00000415894 435 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 MTATP6P11-201ENST00000428071 670 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 AP004217.1-201ENST00000480579 346 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 OR4T1P-201ENST00000554933 911 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 AC135628.1-201ENST00000568867 534 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.18□□□□□ -2.06
SPTA1P02549 CR589904.2-201ENST00000612533 440 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 AC241377.1-201ENST00000619797 406 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 Z99129.2-201ENST00000619967 314 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 AC091046.2-201ENST00000620775 665 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SPTA1P02549 MTCO1P7-201ENST00000419523 1542 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.18□□□□□ -2.06
SPTA1P02549 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.18□□□□□ -2.06
SPTA1P02549 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SPTA1P02549 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SPTA1P02549 MIR708-201ENST00000390708 88 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 RPL21P3-201ENST00000395517 478 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 FAT1P1-201ENST00000406588 507 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.18□□□□□ -2.06
SPTA1P02549 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC2.18□□□□□ -2.06
SPTA1P02549 RPL36AP51-201ENST00000487216 318 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC2.18□□□□□ -2.06
SPTA1P02549 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.18□□□□□ -2.06
SPTA1P02549 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC2.18□□□□□ -2.06
SPTA1P02549 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC2.18□□□□□ -2.06
SPTA1P02549 AC010378.1-201ENST00000619270 362 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 AC106730.3-201ENST00000624568 641 ntBASIC2.18□□□□□ -2.06
SPTA1P02549 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SPTA1P02549 SPATA2P1-201ENST00000431223 2055 ntBASIC2.17□□□□□ -2.06
SPTA1P02549 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms