Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFBP01127 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFBP01127 U3.44-201ENST00000458938 192 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 AC084198.1-201ENST00000477747 402 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 AL024509.2-201ENST00000493462 493 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 HMGB1P22-201ENST00000505315 124 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFBP01127 USP9YP5-201ENST00000511770 630 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 AC010486.1-201ENST00000511793 424 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.64□□□□□ -1.83
PDGFBP01127 MTCO2P32-201ENST00000514865 403 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.64□□□□□ -1.83
PDGFBP01127 AP000790.1-201ENST00000528891 737 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 LRRC6P1-201ENST00000532188 885 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFBP01127 MTCO2P2-201ENST00000591258 225 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.64□□□□□ -1.83
PDGFBP01127 AC112220.2-201ENST00000605513 533 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 AC027449.1-201ENST00000608890 407 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PDGFBP01127 AC069209.1-201ENST00000619282 651 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 AC109454.4-201ENST00000623411 649 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 AP003485.1-201ENST00000625093 753 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PDGFBP01127 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFBP01127 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PDGFBP01127 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFBP01127 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.64□□□□□ -1.83
PDGFBP01127 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PDGFBP01127 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PDGFBP01127 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PDGFBP01127 AL672296.1-201ENST00000427780 2158 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PDGFBP01127 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
PDGFBP01127 ZNF29P-201ENST00000225587 168 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 RNA5SP295-201ENST00000362655 121 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 RNU6-582P-201ENST00000362989 107 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 RNA5SP235-201ENST00000365411 114 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PDGFBP01127 AP000567.1-201ENST00000406413 156 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFBP01127 RAD23BP2-201ENST00000416003 1207 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.63□□□□□ -1.83
PDGFBP01127 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFBP01127 AC092634.2-201ENST00000428146 1010 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.63□□□□□ -1.83
PDGFBP01127 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.63□□□□□ -1.83
PDGFBP01127 MTCO1P53-201ENST00000441633 699 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 AL009048.1-201ENST00000450437 298 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 HMGN2P16-201ENST00000456802 261 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.63□□□□□ -1.83
PDGFBP01127 VPS26AP1-201ENST00000483197 979 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PDGFBP01127 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.63□□□□□ -1.83
PDGFBP01127 AC097462.2-201ENST00000504623 481 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFBP01127 HNRNPKP5-201ENST00000515300 253 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 RNU6-1028P-201ENST00000517164 93 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFBP01127 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.63□□□□□ -1.83
PDGFBP01127 MTCYBP27-201ENST00000555160 670 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.63□□□□□ -1.83
PDGFBP01127 SNORD39.3-201ENST00000584451 71 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.63□□□□□ -1.83
PDGFBP01127 AC128687.1-201ENST00000605304 619 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.63□□□□□ -1.83
PDGFBP01127 PART1_2.1-201ENST00000612397 250 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 AC103858.2-201ENST00000621471 543 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.63□□□□□ -1.83
PDGFBP01127 MIR4727-201ENST00000622232 55 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.63□□□□□ -1.83
PDGFBP01127 MTND2P41-201ENST00000637599 773 ntBASIC3.63□□□□□ -1.83
PDGFBP01127 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PDGFBP01127 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PDGFBP01127 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDGFBP01127 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.62□□□□□ -1.83
PDGFBP01127 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PDGFBP01127 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDGFBP01127 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.62□□□□□ -1.83
PDGFBP01127 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDGFBP01127 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.62□□□□□ -1.83
PDGFBP01127 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.62□□□□□ -1.83
PDGFBP01127 HMGB1P5-201ENST00000255320 642 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 MIR449A-201ENST00000362113 91 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 RNU6-251P-201ENST00000363235 104 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 SNORA5B-201ENST00000363786 132 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PDGFBP01127 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
PDGFBP01127 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.62□□□□□ -1.83
PDGFBP01127 MTND4P3-201ENST00000417829 541 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.62□□□□□ -1.83
PDGFBP01127 FNDC3CP-201ENST00000420795 1155 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.62□□□□□ -1.83
PDGFBP01127 AL035410.1-201ENST00000427409 427 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 MOB1AP1-201ENST00000430903 535 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AL662791.1-201ENST00000441992 928 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.62□□□□□ -1.83
PDGFBP01127 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.62□□□□□ -1.83
PDGFBP01127 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms