Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
USH2AO75445 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC1.09□□□□□ -2.23
USH2AO75445 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.09□□□□□ -2.23
USH2AO75445 AC021269.2-201ENST00000532318 330 ntBASIC1.09□□□□□ -2.23
USH2AO75445 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.09□□□□□ -2.23
USH2AO75445 AC007620.3-201ENST00000608131 497 ntBASIC1.09□□□□□ -2.23
USH2AO75445 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
USH2AO75445 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
USH2AO75445 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
USH2AO75445 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.09□□□□□ -2.24
USH2AO75445 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC1.09□□□□□ -2.24
USH2AO75445 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC1.09□□□□□ -2.24
USH2AO75445 ELL2P4-201ENST00000446870 1376 ntBASIC1.09□□□□□ -2.24
USH2AO75445 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
USH2AO75445 Y_RNA.327-201ENST00000365201 102 ntBASIC1.09□□□□□ -2.24
USH2AO75445 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC1.09□□□□□ -2.24
USH2AO75445 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
USH2AO75445 AL590004.2-201ENST00000404787 371 ntBASIC1.09□□□□□ -2.24
USH2AO75445 RN7SKP140-201ENST00000411196 284 ntBASIC1.09□□□□□ -2.24
USH2AO75445 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC1.09□□□□□ -2.24
USH2AO75445 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.09□□□□□ -2.24
USH2AO75445 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.09□□□□□ -2.24
USH2AO75445 OR4H12P-201ENST00000556269 907 ntBASIC1.09□□□□□ -2.24
USH2AO75445 MIR4452-201ENST00000583004 71 ntBASIC1.09□□□□□ -2.24
USH2AO75445 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
USH2AO75445 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
USH2AO75445 Y_RNA.30-201ENST00000362572 97 ntBASIC1.09□□□□□ -2.24
USH2AO75445 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
USH2AO75445 UBE2V1P5-201ENST00000440070 405 ntBASIC1.09□□□□□ -2.24
USH2AO75445 THAP6-203ENST00000502620 582 ntTSL 3 BASIC1.09□□□□□ -2.24
USH2AO75445 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.09□□□□□ -2.24
USH2AO75445 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.09□□□□□ -2.24
USH2AO75445 AC112673.1-201ENST00000513168 575 ntBASIC1.09□□□□□ -2.24
USH2AO75445 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.09□□□□□ -2.24
USH2AO75445 AC011604.1-201ENST00000545978 196 ntBASIC1.09□□□□□ -2.24
USH2AO75445 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC1.09□□□□□ -2.24
USH2AO75445 AC005046.1-201ENST00000608515 625 ntBASIC1.09□□□□□ -2.24
USH2AO75445 GTF2H2B-203ENST00000508065 1432 ntBASIC1.09□□□□□ -2.24
USH2AO75445 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
USH2AO75445 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC1.08□□□□□ -2.24
USH2AO75445 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 MIR378A-201ENST00000362177 66 ntBASIC1.08□□□□□ -2.24
USH2AO75445 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC1.08□□□□□ -2.24
USH2AO75445 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.08□□□□□ -2.24
USH2AO75445 RPL23AP58-201ENST00000440453 469 ntBASIC1.08□□□□□ -2.24
USH2AO75445 AC002553.2-201ENST00000453217 340 ntBASIC1.08□□□□□ -2.24
USH2AO75445 RN7SL442P-201ENST00000473804 320 ntBASIC1.08□□□□□ -2.24
USH2AO75445 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.08□□□□□ -2.24
USH2AO75445 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC1.08□□□□□ -2.24
USH2AO75445 TGIF1P1-201ENST00000558095 802 ntBASIC1.08□□□□□ -2.24
USH2AO75445 MIR7973-1-201ENST00000614683 76 ntBASIC1.08□□□□□ -2.24
USH2AO75445 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC1.08□□□□□ -2.24
USH2AO75445 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 AL606537.1-201ENST00000607258 2011 ntBASIC1.08□□□□□ -2.24
USH2AO75445 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.08□□□□□ -2.24
USH2AO75445 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.08□□□□□ -2.24
USH2AO75445 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 SCN1A-220ENST00000641603 12506 ntBASIC1.08□□□□□ -2.24
USH2AO75445 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 AL445646.1-201ENST00000431784 216 ntBASIC1.08□□□□□ -2.24
USH2AO75445 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC1.08□□□□□ -2.24
USH2AO75445 AC021733.2-201ENST00000518830 497 ntBASIC1.08□□□□□ -2.24
USH2AO75445 OR8L1P-201ENST00000534005 955 ntBASIC1.08□□□□□ -2.24
USH2AO75445 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC1.08□□□□□ -2.24
USH2AO75445 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.08□□□□□ -2.24
USH2AO75445 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC1.08□□□□□ -2.24
USH2AO75445 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC1.08□□□□□ -2.24
USH2AO75445 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.08□□□□□ -2.24
USH2AO75445 Y_RNA.68-201ENST00000362881 102 ntBASIC1.08□□□□□ -2.24
USH2AO75445 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.08□□□□□ -2.24
USH2AO75445 NPM1P29-201ENST00000483112 803 ntBASIC1.08□□□□□ -2.24
USH2AO75445 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
USH2AO75445 AC006111.3-201ENST00000622137 383 ntBASIC1.08□□□□□ -2.24
USH2AO75445 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC1.08□□□□□ -2.24
USH2AO75445 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
USH2AO75445 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
USH2AO75445 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 USP9YP20-201ENST00000419224 558 ntBASIC1.08□□□□□ -2.24
USH2AO75445 YWHAEP5-201ENST00000431545 765 ntBASIC1.08□□□□□ -2.24
USH2AO75445 AL353093.1-201ENST00000441292 436 ntBASIC1.08□□□□□ -2.24
USH2AO75445 AC010469.1-201ENST00000463864 576 ntBASIC1.08□□□□□ -2.24
USH2AO75445 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
USH2AO75445 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC1.08□□□□□ -2.24
USH2AO75445 AC233702.9-201ENST00000581528 203 ntBASIC1.08□□□□□ -2.24
USH2AO75445 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.08□□□□□ -2.24
USH2AO75445 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.08□□□□□ -2.24
USH2AO75445 MIR3199-2-201ENST00000636243 86 ntBASIC1.08□□□□□ -2.24
USH2AO75445 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
USH2AO75445 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 RPL9P7-201ENST00000330965 580 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms